RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 MRPS9P82933 396 aaKnown RBP8.47□□□□□ -1.05
NR1I3-231ENST00000512340 BEX3Q00994 111 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 KRT76Q01546 638 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 ITGA7Q13683 1181 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 PRR16Q569H4 304 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 FAM47CQ5HY64 1035 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 FAM160B1Q5W0V3 765 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 TYW1BQ6NUM6 668 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 NFRKBQ6P4R8 1299 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 CXCL17Q6UXB2 119 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 CYFIP1Q7L576 1253 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 NEK8Q86SG6 692 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 C7orf31Q8N865 590 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 IL31RAQ8NI17 732 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 TBCKQ8TEA7 893 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 AFG1LQ8WV93 481 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 SEPT1Q8WYJ6 367 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 LENG1Q96BZ8 264 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-231ENST00000512340 TMX3Q96JJ7 454 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 KIF2CQ99661 725 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 ZNF577Q9BSK1 485 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 PRO3102Q9H379 93 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 JPH1Q9HDC5 661 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-231ENST00000512340 KCNH7Q9NS40 1196 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 TMEM260Q9NX78 707 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 COL6A3P12111 3177 aa8.47□□□□□ -1.05
NR1I3-231ENST00000512340 KIAA1217Q5T5P2 1943 aa8.46□□□□□ -1.05
NR1I3-231ENST00000512340 IPO5O00410 1097 aaKnown RBP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 DKC1O60832 514 aaKnown RBP eCLIP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 LARGE1O95461 756 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 CTDNEP1O95476 244 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 MMP1P03956 469 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 RPLP2P05387 115 aaKnown RBP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 MMP3P08254 477 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 ITGB5P18084 799 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 CIITAP33076 1130 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 SLC26A2P50443 739 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 PURAQ00577 322 aaKnown RBP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 ARHGAP1Q07960 439 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 ORC2Q13416 577 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 KRT40Q6A162 431 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 MIS18BP1Q6P0N0 1132 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 SMAP1Q8IYB5 467 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 DIS3L2Q8IYB7 885 aaKnown RBP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 SLFN12Q8IYM2 578 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 C7orf61Q8IZ16 206 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 RETREG2Q8NC44 543 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 GLG1Q92896 1179 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 PGBD1Q96JS3 809 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 FAM20AQ96MK3 541 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 RIT2Q99578 217 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 FOXP1Q9H334 677 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-231ENST00000512340 SMARCAD1Q9H4L7 1026 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 TMEM39AQ9NV64 488 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 SLC9A2Q9UBY0 812 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 KCNJ14Q9UNX9 436 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 LAMA3Q16787 3333 aa8.46□□□□□ -1.06
NR1I3-231ENST00000512340 LCTP09848 1927 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 K7ELQ4 463 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 BACH1O14867 736 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 TBX3O15119 743 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 JAK2O60674 1132 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 PQBP1O60828 265 aaKnown RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 GAS7O60861 476 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 RGS20O76081 388 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 ARIH2O95376 493 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 PSAPP07602 524 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 CLTBP09497 229 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 SFNP31947 248 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 DEKP35659 375 aaKnown RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 JAK3P52333 1124 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 SP4Q02446 784 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 BFSP2Q13515 415 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 BECN1Q14457 450 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 SNX17Q15036 470 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 LETM2Q2VYF4 491 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 TRIM60Q495X7 471 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 Q4G0T1 1027 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 MCTP1Q6DN14 999 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 PPP4R3AQ6IN85 833 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 CCSAPQ6IQ19 270 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 ZNF746Q6NUN9 644 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 PIK3AP1Q6ZUJ8 805 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 ANKRD33Q7Z3H0 272 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 FBXO18Q8NFZ0 1043 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 RASGRP4Q8TDF6 673 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 COPS5Q92905 334 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 INTS4Q96HW7 963 aaKnown RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 AIFM3Q96NN9 605 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 TEKT3Q9BXF9 490 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 AGO4Q9HCK5 861 aaKnown RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 PRDM5Q9NQX1 630 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 ERAP1Q9NZ08 941 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 DDX25Q9UHL0 483 aaKnown RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 SAMM50Q9Y512 469 aa8.45□□□□□ -1.06
NR1I3-231ENST00000512340 DDX49Q9Y6V7 483 aaKnown RBP8.45□□□□□ -1.06
NR1I3-231ENST00000512340 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
NR1I3-231ENST00000512340 CYP3A7-CYP3A51PA0A087WV96 503 aa8.44□□□□□ -1.06
NR1I3-231ENST00000512340 MYADML2A6NDP7 307 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms