RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 GALNTL6Q49A17 601 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ASRGL1Q7L266 308 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 VPS37DQ86XT2 251 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 STKLD1Q8NE28 680 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 OR2W6PQ8NHA6 318 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ASAP3Q8TDY4 903 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ABTB1Q969K4 478 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 RNF25Q96BH1 459 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 LENG1Q96BZ8 264 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 CLIP3Q96DZ5 547 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 AGBL1Q96MI9 1066 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 KRT23Q9C075 422 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 EPB41L5Q9HCM4 733 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 PDP2Q9P2J9 529 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 SUCLA2Q9P2R7 463 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 BCL9O00512 1426 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 FAM237AA0A1B0GTK4 181 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 H0YGN5 161 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 AFMP43652 599 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 PTDSS1P48651 473 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 RHBDL3P58872 404 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 CYP27A1Q02318 531 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 ZNF844Q08AG5 666 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 BNIP1Q12981 228 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 HLFQ16534 295 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 MUM1Q2TAK8 710 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 AGBL2Q5U5Z8 902 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 GIGYF2Q6Y7W6 1299 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 HELBQ8NG08 1087 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 DEPTORQ8TB45 409 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 SNRNP27Q8WVK2 155 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 CENPTQ96BT3 561 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 NUDT16Q96DE0 195 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 ABCC12Q96J65 1359 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 DBNDD2Q9BQY9 259 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 TCHPQ9BT92 498 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 ZNF180Q9UJW8 692 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 NOVA2Q9UNW9 492 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 ITM2BQ9Y287 266 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 FRMD4BQ9Y2L6 1034 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 MAP3K2Q9Y2U5 619 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 NFS1Q9Y697 457 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 USH1CQ9Y6N9 552 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 KLF18A0A0U1RQI7 1052 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 MACROD2A1Z1Q3 448 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 AKR1B10O60218 316 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 PEX11AO75192 247 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 HEXIM1O94992 359 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 TJP3O95049 919 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 TRIM21P19474 475 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 KCNA4P22459 653 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 ERCC5P28715 1186 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 HOXD11P31277 338 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 PLCD1P51178 756 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 MAGOHP61326 146 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 KRT83P78385 493 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 GPSM2P81274 684 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 RCN2Q14257 317 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 MCMDC2Q4G0Z9 681 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 WDR59Q6PJI9 974 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 C3orf67Q6ZVT6 689 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 TRIM50Q86XT4 487 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 RBBP8NLQ8NC74 664 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 SLC17A8Q8NDX2 589 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 MAGOHBQ96A72 148 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 EEF2KMTQ96G04 330 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 ZNF274Q96GC6 653 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 DHTKD1Q96HY7 919 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 PBKQ96KB5 322 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 SMC6Q96SB8 1091 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 ELAC2Q9BQ52 826 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 CNOT10Q9H9A5 744 aaKnown RBP7.98□□□□□ -1.13
CPNE4-208ENST00000511604 LGR6Q9HBX8 967 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 TAB2Q9NYJ8 693 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 CYP39A1Q9NYL5 469 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 RABL2BQ9UNT1 228 aa7.98□□□□□ -1.13
CPNE4-208ENST00000511604 MAGEA13PA6NCF6 341 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 DCDC2CA8MYV0 355 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 NKRFO15226 690 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 NCK2O43639 380 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 PRLRP16471 622 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 ANTXR2P58335 489 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 HPCAP84074 193 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 TFCP2Q12800 502 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 TRIM14Q14142 442 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 OLFML2BQ68BL8 750 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 MDM1Q8TC05 714 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 CATSPER2Q96P56 530 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 MIS12Q9H081 205 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 TAOK3Q9H2K8 898 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 RBM12Q9NTZ6 932 aaKnown RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 GGT7Q9UJ14 662 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 EDC4Q6P2E9 1401 aaKnown RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 PTPRUQ92729 1446 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 GOLGA8BA8MQT2 603 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 FOXP2O15409 715 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms