RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GPR20Q99678 358 aa26.35■■□□□ 1.81
SNF8-209ENST00000510558 ZNF576Q9H609 170 aa26.35■■□□□ 1.81
SNF8-209ENST00000510558 TUT1Q9H6E5 874 aaKnown RBP26.35■■□□□ 1.81
SNF8-209ENST00000510558 hCG_1984214I3L0E3 225 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 ACTN1P12814 892 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 SELPP16109 830 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 RPS6KB1P23443 525 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 ZNF200P98182 395 aaPredicted RBP26.34■■□□□ 1.81
SNF8-209ENST00000510558 PTK7Q13308 1070 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 ZNF713Q8N859 430 aaPredicted RBP26.34■■□□□ 1.81
SNF8-209ENST00000510558 CDHR1Q96JP9 859 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 USP26Q9BXU7 913 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 FTOQ9C0B1 505 aaKnown RBP eCLIP26.34■■□□□ 1.81
SNF8-209ENST00000510558 EHMT1Q9H9B1 1298 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 RIC8AQ9NPQ8 531 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 MSRAQ9UJ68 235 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 UBIAD1Q9Y5Z9 338 aa26.34■■□□□ 1.81
SNF8-209ENST00000510558 CCDC196A0A1B0GTZ2 297 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 STXBP3O00186 592 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 ITGB5P18084 799 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 PSMA5P28066 241 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 ADD1P35611 737 aaKnown RBP26.33■■□□□ 1.81
SNF8-209ENST00000510558 SP4Q02446 784 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 HIC1Q14526 733 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 GRIN2CQ14957 1233 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 LRRC8DQ7L1W4 858 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 GIMAP8Q8ND71 665 aaPredicted RBP26.33■■□□□ 1.81
SNF8-209ENST00000510558 BARHL2Q9NY43 387 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 TELO2Q9Y4R8 837 aa26.33■■□□□ 1.81
SNF8-209ENST00000510558 NID2Q14112 1375 aa26.33■■□□□ 1.8
SNF8-209ENST00000510558 EPB41L2O43491 1005 aaKnown RBP26.32■■□□□ 1.8
SNF8-209ENST00000510558 CKBP12277 381 aa26.32■■□□□ 1.8
SNF8-209ENST00000510558 ADCY7P51828 1080 aa26.32■■□□□ 1.8
SNF8-209ENST00000510558 TEX2Q8IWB9 1127 aa26.32■■□□□ 1.8
SNF8-209ENST00000510558 FBXL16Q8N461 479 aa26.32■■□□□ 1.8
SNF8-209ENST00000510558 WNT8BQ93098 351 aa26.32■■□□□ 1.8
SNF8-209ENST00000510558 MYO9BQ13459 2157 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 ATP9AO75110 1047 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 KCNA2P16389 499 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 ATP2A2P16615 1042 aaKnown RBP26.31■■□□□ 1.8
SNF8-209ENST00000510558 MTMR1Q13613 665 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 TRIM71Q2Q1W2 868 aaKnown RBP26.31■■□□□ 1.8
SNF8-209ENST00000510558 TRIM50Q86XT4 487 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 AGXT2Q9BYV1 514 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 NKX2-4Q9H2Z4 354 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 PPP4R2Q9NY27 417 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 YBX2Q9Y2T7 364 aaKnown RBP26.31■■□□□ 1.8
SNF8-209ENST00000510558 KAT6AQ92794 2004 aa26.31■■□□□ 1.8
SNF8-209ENST00000510558 C17orf102A2RUQ5 167 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 SMCO2A6NFE2 343 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 PARNO95453 639 aaKnown RBP26.3■■□□□ 1.8
SNF8-209ENST00000510558 SMIM10L2AP0DMW4 78 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 SMIM10L2BP0DMW5 78 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 FOSL2P15408 326 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 RABGGTBP53611 331 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 GPNMBQ14956 572 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 UTP14CQ5TAP6 766 aaKnown RBP26.3■■□□□ 1.8
SNF8-209ENST00000510558 PGBD1Q96JS3 809 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 JADE2Q9NQC1 790 aa26.3■■□□□ 1.8
SNF8-209ENST00000510558 ZNF215Q9UL58 517 aaPredicted RBP26.3■■□□□ 1.8
SNF8-209ENST00000510558 CDH23Q9H251 3354 aa26.29■■□□□ 1.8
SNF8-209ENST00000510558 FOSP01100 380 aaPredicted RBP26.29■■□□□ 1.8
SNF8-209ENST00000510558 HOXC8P31273 242 aa26.29■■□□□ 1.8
SNF8-209ENST00000510558 PFKFB3Q16875 520 aaPredicted RBP26.29■■□□□ 1.8
SNF8-209ENST00000510558 SERINC5Q86VE9 423 aa26.29■■□□□ 1.8
SNF8-209ENST00000510558 MAFAQ8NHW3 353 aaPredicted RBP26.29■■□□□ 1.8
SNF8-209ENST00000510558 ANO3Q9BYT9 981 aa26.29■■□□□ 1.8
SNF8-209ENST00000510558 GLT8D2Q9H1C3 349 aa26.29■■□□□ 1.8
SNF8-209ENST00000510558 PKD2L1Q9P0L9 805 aa26.29■■□□□ 1.8
SNF8-209ENST00000510558 PTPRSQ13332 1948 aa26.29■■□□□ 1.8
SNF8-209ENST00000510558 SCG2P13521 617 aa26.28■■□□□ 1.8
SNF8-209ENST00000510558 TRAF7Q6Q0C0 670 aa26.28■■□□□ 1.8
SNF8-209ENST00000510558 ATP6V0A1Q93050 837 aa26.28■■□□□ 1.8
SNF8-209ENST00000510558 SLC9A7Q96T83 725 aa26.28■■□□□ 1.8
SNF8-209ENST00000510558 RNPEPQ9H4A4 650 aa26.28■■□□□ 1.8
SNF8-209ENST00000510558 PCDHA11Q9Y5I1 949 aa26.28■■□□□ 1.8
SNF8-209ENST00000510558 MAFGO15525 162 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 NBNO60934 754 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 BAIAP3O94812 1187 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 CXCL10P02778 98 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 TCF7P36402 384 aaPredicted RBP26.27■■□□□ 1.8
SNF8-209ENST00000510558 CLK2P49760 499 aaKnown RBP26.27■■□□□ 1.8
SNF8-209ENST00000510558 AP3B2Q13367 1082 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 ZNF618Q5T7W0 954 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 MXRA8Q9BRK3 442 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 SLC28A3Q9HAS3 691 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 TMEM260Q9NX78 707 aa26.27■■□□□ 1.8
SNF8-209ENST00000510558 TREHO43280 583 aa26.26■■□□□ 1.79
SNF8-209ENST00000510558 MYOGP15173 224 aa26.26■■□□□ 1.79
SNF8-209ENST00000510558 ERICH6BQ5W0A0 696 aa26.26■■□□□ 1.79
SNF8-209ENST00000510558 RUFY3Q7L099 469 aa26.26■■□□□ 1.79
SNF8-209ENST00000510558 SEPT1Q8WYJ6 367 aa26.26■■□□□ 1.79
SNF8-209ENST00000510558 GNAT1P11488 350 aa26.25■■□□□ 1.79
SNF8-209ENST00000510558 SREBF1P36956 1147 aa26.25■■□□□ 1.79
SNF8-209ENST00000510558 CNKSR3Q6P9H4 555 aa26.25■■□□□ 1.79
SNF8-209ENST00000510558 CYP2W1Q8TAV3 490 aa26.25■■□□□ 1.79
SNF8-209ENST00000510558 PHOSPHO2Q8TCD6 241 aa26.25■■□□□ 1.79
SNF8-209ENST00000510558 ZSWIM6Q9HCJ5 1215 aa26.25■■□□□ 1.79
SNF8-209ENST00000510558 KCNH7Q9NS40 1196 aa26.25■■□□□ 1.79
SNF8-209ENST00000510558 SETD4Q9NVD3 440 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms