RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 MCUQ8NE86 351 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 PCDHB6Q9Y5E3 794 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 MAGI2Q86UL8 1455 aa11.47□□□□□ -0.57
NEK1-206ENST00000510533 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.57
NEK1-206ENST00000510533 DR1Q01658 176 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 FMO2Q99518 471 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 UBE2TQ9NPD8 197 aaPredicted RBP11.46□□□□□ -0.57
NEK1-206ENST00000510533 SPATS2LQ9NUQ6 558 aaKnown RBP11.46□□□□□ -0.57
NEK1-206ENST00000510533 XDHP47989 1333 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 HMGB1P1B2RPK0 211 aaPredicted RBP11.46□□□□□ -0.57
NEK1-206ENST00000510533 CDC25AP30304 524 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 CYP27A1Q02318 531 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 KCTD1Q719H9 257 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 PPWD1Q96BP3 646 aaKnown RBP11.46□□□□□ -0.57
NEK1-206ENST00000510533 PUS7LQ9H0K6 701 aaKnown RBP11.46□□□□□ -0.57
NEK1-206ENST00000510533 NDST4Q9H3R1 872 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 PCIF1Q9H4Z3 704 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 TBK1Q9UHD2 729 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 LEMD3Q9Y2U8 911 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 GOLGA8SH3BPF8 625 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 LPXNO60711 386 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 UBXN2AP68543 259 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 DNAJC24Q6P3W2 148 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 EMBQ6PCB8 327 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 SLC7A3Q8WY07 619 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 OSBP2Q969R2 916 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
NEK1-206ENST00000510533 ATG3Q9NT62 314 aa11.46□□□□□ -0.57
NEK1-206ENST00000510533 PRKAB2O43741 272 aa11.46□□□□□ -0.58
NEK1-206ENST00000510533 PLCG1P19174 1290 aa11.46□□□□□ -0.58
NEK1-206ENST00000510533 IGBP1P78318 339 aa11.46□□□□□ -0.58
NEK1-206ENST00000510533 BASP1P80723 227 aaKnown RBP11.46□□□□□ -0.58
NEK1-206ENST00000510533 SLC7A5Q01650 507 aa11.46□□□□□ -0.58
NEK1-206ENST00000510533 CUL1Q13616 776 aa11.46□□□□□ -0.58
NEK1-206ENST00000510533 MB21D1Q8N884 522 aa11.46□□□□□ -0.58
NEK1-206ENST00000510533 ZMYND12Q9H0C1 365 aa11.46□□□□□ -0.58
NEK1-206ENST00000510533 EXOC1LA0A1B0GW35 172 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 XPOTO43592 962 aaKnown RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 MFAP3LO75121 409 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 PNMA6AP0CW24 399 aaPredicted RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 ATP1A3P13637 1013 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 SPATA31E1Q6ZUB1 1445 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 TMEM2Q9UHN6 1383 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 CASP2P42575 452 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 PHEXP78562 749 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 KRT31Q15323 416 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 ZSWIM5Q9P217 1185 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 MEIS1O00470 390 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 LIFRP42702 1097 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 DYNLT1P63172 113 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 LRRC63Q05C16 580 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 NECTIN1Q15223 517 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 LLGL1Q15334 1064 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 TAF11Q15544 211 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 DARS2Q6PI48 645 aaKnown RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 C4orf50Q6ZRC1 276 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 BANK1Q8NDB2 785 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 JPH2Q9BR39 696 aaPredicted RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 EFHD1Q9BUP0 239 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 DRC3Q9H069 523 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■■■□ 21.2
NEK1-206ENST00000510533 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 DNAJC8O75937 253 aaPredicted RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 GUCY2CP25092 1073 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 IL1RL1Q01638 556 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 C6orf118Q5T5N4 469 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 HIBCHQ6NVY1 386 aaPredicted RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 SARM1Q6SZW1 724 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 CXorf38Q8TB03 319 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 GDAP1Q8TB36 358 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 AP1M1Q9BXS5 423 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 SCOCQ9UIL1 159 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 ZNF521Q96K83 1311 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 PFDN1O60925 122 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 PLA2G4BP0C869 781 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 ARL6IP4Q66PJ3 421 aaKnown RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 GADL1Q6ZQY3 521 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 CCNYQ8ND76 341 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 FAM149B1Q96BN6 582 aa11.45□□□□□ -0.58
NEK1-206ENST00000510533 FAM193BQ96PV7 902 aaPredicted RBP11.45□□□□□ -0.58
NEK1-206ENST00000510533 MAP3K7O43318 606 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 SKIP12755 728 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 ABCD1P33897 745 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 SLC16A2P36021 539 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 MXI1P50539 228 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 ESRRGP62508 458 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 ADCY2Q08462 1091 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 BBS5Q8N3I7 341 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 DNAAF3Q8N9W5 541 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 SKA2Q8WVK7 121 aaPredicted RBP11.44□□□□□ -0.58
NEK1-206ENST00000510533 XAB2Q9HCS7 855 aaKnown RBP11.44□□□□□ -0.58
NEK1-206ENST00000510533 MED7O43513 233 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 PTPREP23469 700 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
NEK1-206ENST00000510533 COA7Q96BR5 231 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms