RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 PKN1Q16512 942 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 RASIP1Q5U651 963 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 FAM161BQ96MY7 647 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 GPR20Q99678 358 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 LARP6Q9BRS8 491 aaKnown RBP21.26■□□□□ 0.99
LSM6-206ENST00000510331 TM6SF1Q9BZW5 370 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 EHMT1Q9H9B1 1298 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 CXXC1Q9P0U4 656 aaPredicted RBP21.26■□□□□ 0.99
LSM6-206ENST00000510331 UBIAD1Q9Y5Z9 338 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 TET1Q8NFU7 2136 aa21.26■□□□□ 0.99
LSM6-206ENST00000510331 RBAK-RBAKDNI3L0D1 243 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 PITPNM1O00562 1244 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 ADAMTS3O15072 1205 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 ATP9AO75110 1047 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 CLK2P49760 499 aaKnown RBP21.25■□□□□ 0.99
LSM6-206ENST00000510331 MTMR1Q13613 665 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 HIC1Q14526 733 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 NTRK3Q16288 839 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 MTMR10Q9NXD2 777 aa21.25■□□□□ 0.99
LSM6-206ENST00000510331 ZNF200P98182 395 aaPredicted RBP21.24■□□□□ 0.99
LSM6-206ENST00000510331 ZNF697Q5TEC3 545 aa21.24■□□□□ 0.99
LSM6-206ENST00000510331 OTOP2Q7RTS6 562 aa21.24■□□□□ 0.99
LSM6-206ENST00000510331 DEFB128Q7Z7B8 93 aa21.24■□□□□ 0.99
LSM6-206ENST00000510331 HERVK_113Q902F9 699 aa21.24■□□□□ 0.99
LSM6-206ENST00000510331 WNT8BQ93098 351 aa21.24■□□□□ 0.99
LSM6-206ENST00000510331 SENP7Q9BQF6 1050 aa21.24■□□□□ 0.99
LSM6-206ENST00000510331 SLC26A6Q9BXS9 759 aa21.24■□□□□ 0.99
LSM6-206ENST00000510331 PRPF3O43395 683 aaKnown RBP21.23■□□□□ 0.99
LSM6-206ENST00000510331 AP3B2Q13367 1082 aa21.23■□□□□ 0.99
LSM6-206ENST00000510331 BFSP2Q13515 415 aa21.23■□□□□ 0.99
LSM6-206ENST00000510331 CYP2W1Q8TAV3 490 aa21.23■□□□□ 0.99
LSM6-206ENST00000510331 CDHR1Q96JP9 859 aa21.23■□□□□ 0.99
LSM6-206ENST00000510331 GUCD1Q96NT3 240 aa21.23■□□□□ 0.99
LSM6-206ENST00000510331 RNF26Q9BY78 433 aaPredicted RBP21.23■□□□□ 0.99
LSM6-206ENST00000510331 JADE2Q9NQC1 790 aa21.23■□□□□ 0.99
LSM6-206ENST00000510331 CHD9Q3L8U1 2897 aa21.23■□□□□ 0.99
LSM6-206ENST00000510331 PTPRSQ13332 1948 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 ESYT2A0FGR8 921 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 GRXCR1A8MXD5 290 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 H3BRB1 525 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 FGBP02675 491 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 IQCF3P0C7M6 154 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 IFNAR1P17181 557 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 SREBF1P36956 1147 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 UTP14CQ5TAP6 766 aaKnown RBP21.22■□□□□ 0.99
LSM6-206ENST00000510331 JAKMIP3Q5VZ66 844 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 TEX2Q8IWB9 1127 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 CCDC155Q8N6L0 562 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 CAGE1Q8TC20 777 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 TTYH1Q9H313 450 aaPredicted RBP21.22■□□□□ 0.99
LSM6-206ENST00000510331 TUT1Q9H6E5 874 aaKnown RBP21.22■□□□□ 0.99
LSM6-206ENST00000510331 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
LSM6-206ENST00000510331 EYSQ5T1H1 3165 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 FOSP01100 380 aaPredicted RBP21.21■□□□□ 0.99
LSM6-206ENST00000510331 SMIM10L2AP0DMW4 78 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 SMIM10L2BP0DMW5 78 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 DNAJB2P25686 324 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 RBL2Q08999 1139 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 STK3Q13188 491 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 RETREG2Q8NC44 543 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 GIMAP8Q8ND71 665 aaPredicted RBP21.21■□□□□ 0.99
LSM6-206ENST00000510331 MXRA8Q9BRK3 442 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 ZMYND12Q9H0C1 365 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 GLT8D2Q9H1C3 349 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 VPS54Q9P1Q0 977 aa21.21■□□□□ 0.99
LSM6-206ENST00000510331 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 PFKMP08237 780 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 HOXC8P31273 242 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 RFC2P35250 354 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 TCF7P36402 384 aaPredicted RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 PBX2P40425 430 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 ARHGAP4P98171 946 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 AKAP17AQ02040 695 aaKnown RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 PTK7Q13308 1070 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 TRIM71Q2Q1W2 868 aaKnown RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 LRRC8DQ7L1W4 858 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 RPUSD2Q8IZ73 545 aaKnown RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 REXO1Q8N1G1 1221 aaKnown RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 RASGRP4Q8TDF6 673 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 AFAP1L1Q8TED9 768 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 CCDC12Q8WUD4 166 aaPredicted RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 MTIF3Q9H2K0 278 aaKnown RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 KCNH7Q9NS40 1196 aa21.2■□□□□ 0.98
LSM6-206ENST00000510331 ZNF215Q9UL58 517 aaPredicted RBP21.2■□□□□ 0.98
LSM6-206ENST00000510331 C17orf102A2RUQ5 167 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 ZBBXA8MT70 800 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 CKBP12277 381 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 SELPP16109 830 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 CEP55Q53EZ4 464 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 PBX4Q9BYU1 374 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 C6orf50Q9HD87 102 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 JPH1Q9HDC5 661 aaPredicted RBP21.19■□□□□ 0.98
LSM6-206ENST00000510331 SIP14410 1827 aa21.19■□□□□ 0.98
LSM6-206ENST00000510331 KAT6AQ92794 2004 aa21.18■□□□□ 0.98
LSM6-206ENST00000510331 ARP10275 920 aa21.18■□□□□ 0.98
LSM6-206ENST00000510331 ITGB3BPQ13352 177 aaPredicted RBP21.18■□□□□ 0.98
LSM6-206ENST00000510331 TRAF7Q6Q0C0 670 aa21.18■□□□□ 0.98
LSM6-206ENST00000510331 SERINC5Q86VE9 423 aa21.18■□□□□ 0.98
LSM6-206ENST00000510331 CCDC148Q8NFR7 591 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms