RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 DNAJC2Q99543 621 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 IPPKQ9H8X2 491 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 WASF3Q9UPY6 502 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 NKRFO15226 690 aaKnown RBP eCLIP8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 SMARCA5O60264 1052 aaPredicted RBP8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 GNAT1P11488 350 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 RPL13P26373 211 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 PRR31Q5SQ13 230 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 TTLL7Q6ZT98 887 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 RBM12BQ8IXT5 1001 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 TTLL6Q8N841 843 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 JMYQ8N9B5 988 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 CLEC4DQ8WXI8 215 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 KISS1RQ969F8 398 aaPredicted RBP8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 DNAJC7Q99615 494 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 ALG1Q9BT22 464 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 DHRS4Q9BTZ2 278 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 ADAM7Q9H2U9 754 aa8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 MRPS23Q9Y3D9 190 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-206ENST00000508524 FAM47E-STBD1D6RA91 191 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 AQP7O14520 342 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 SPIRE1Q08AE8 756 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 NFIXQ14938 502 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 NT5DC1Q5TFE4 455 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 FRMD5Q7Z6J6 570 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 ZNF761Q86XN6 746 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 TRIM48Q8IWZ4 208 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 HSPBP1Q9NZL4 362 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 TELO2Q9Y4R8 837 aa8.15□□□□□ -1.1
TOPBP1-206ENST00000508524 WNT9AO14904 365 aa8.14□□□□□ -1.11
TOPBP1-206ENST00000508524 NOBOXO60393 691 aa8.14□□□□□ -1.11
TOPBP1-206ENST00000508524 TUSC3Q13454 348 aa8.14□□□□□ -1.11
TOPBP1-206ENST00000508524 RTP5Q14D33 572 aa8.14□□□□□ -1.11
TOPBP1-206ENST00000508524 ADAMTS17Q8TE56 1095 aa8.14□□□□□ -1.11
TOPBP1-206ENST00000508524 IPO9Q96P70 1041 aaKnown RBP8.14□□□□□ -1.11
TOPBP1-206ENST00000508524 PDGFDQ9GZP0 370 aaPredicted RBP8.14□□□□□ -1.11
TOPBP1-206ENST00000508524 LTFP02788 710 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 GABREP78334 506 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 GRIN1Q05586 938 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 PAK1Q13153 545 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 ZC3H12BQ5HYM0 836 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 MTDHQ86UE4 582 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 PROSER1Q86XN7 944 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 RELTQ969Z4 430 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 TEPSINQ96N21 525 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 OSBPL2Q9H1P3 480 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 RBPJLQ9UBG7 517 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 PCDHA8Q9Y5H6 950 aa8.13□□□□□ -1.11
TOPBP1-206ENST00000508524 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
TOPBP1-206ENST00000508524 ARVCFO00192 962 aa8.12□□□□□ -1.11
TOPBP1-206ENST00000508524 PCDH19Q8TAB3 1148 aa8.12□□□□□ -1.11
TOPBP1-206ENST00000508524 SH3RF2Q8TEC5 729 aa8.12□□□□□ -1.11
TOPBP1-206ENST00000508524 ZSWIM3Q96MP5 696 aa8.12□□□□□ -1.11
TOPBP1-206ENST00000508524 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
TOPBP1-206ENST00000508524 DSEQ9UL01 958 aa8.12□□□□□ -1.11
TOPBP1-206ENST00000508524 ZNF28P17035 718 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 EPHA5P54756 1037 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 GJA9P57773 515 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 GUCY1A3Q02108 690 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 TMC5Q6UXY8 1006 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 CXorf38Q8TB03 319 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 TMEM209Q96SK2 561 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 USP40Q9NVE5 1235 aa8.11□□□□□ -1.11
TOPBP1-206ENST00000508524 PRICKLE3O43900 615 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 FOXD2O60548 495 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 PAN2Q504Q3 1202 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 KCTD1Q719H9 257 aa8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 LILRB2Q8N423 598 aa8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 THAP3Q8WTV1 239 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 CD244Q9BZW8 370 aa8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 LNPKQ9C0E8 428 aa8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 NUB1Q9Y5A7 615 aa8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 PCDHA9Q9Y5H5 950 aa8.1□□□□□ -1.11
TOPBP1-206ENST00000508524 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 CRTAMO95727 393 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 FAHP16930 419 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 MLLT6P55198 1093 aaPredicted RBP8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 RGL3Q3MIN7 710 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 C2orf27AQ580R0 203 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 FAM26FQ5R3K3 315 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 ZFYVE27Q5T4F4 411 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 GSTCDQ8NEC7 633 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 ZSWIM2Q8NEG5 633 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 CLIC6Q96NY7 704 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 CDK11AQ9UQ88 783 aaPredicted RBP8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 PTCH2Q9Y6C5 1203 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 DUSP10Q9Y6W6 482 aa8.09□□□□□ -1.11
TOPBP1-206ENST00000508524 NCANO14594 1321 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 NAT1P18440 290 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 TRIM61Q5EBN2 209 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 DTX3Q8N9I9 347 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 SLC7A14Q8TBB6 771 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 ZCCHC14Q8WYQ9 949 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 FBXW5Q969U6 566 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 NDOR1Q9UHB4 597 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 CBLCQ9ULV8 474 aa8.08□□□□□ -1.12
TOPBP1-206ENST00000508524 SRPK3Q9UPE1 567 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms