RNA–Protein interactions for RNA: ENST00000508385.5

SH3BP2-213, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-213ENST00000508385 CALM1P0DP23 149 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 CALM2P0DP24 149 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 CALM3P0DP25 149 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 CKBP12277 381 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 GHRHRQ02643 423 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 KCNV1Q6PIU1 500 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 MLXIPQ9HAP2 919 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 NID2Q14112 1375 aa16.84■□□□□ 0.29
SH3BP2-213ENST00000508385 GOLGA8BA8MQT2 603 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 TNFRSF10AO00220 468 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 UBA1P22314 1058 aaKnown RBP16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 WDR5P61964 334 aaKnown RBP16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 ZNF200P98182 395 aaPredicted RBP16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 TAP1Q03518 808 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 ANKRD1Q15327 319 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 MYSM1Q5VVJ2 828 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 TMCO2Q7Z6W1 182 aaPredicted RBP16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 VSIG10LQ86VR7 867 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 ADAMTS19Q8TE59 1207 aa16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 GPKOWQ92917 476 aaPredicted RBP eCLIP16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 ZNF274Q96GC6 653 aaPredicted RBP16.83■□□□□ 0.28
SH3BP2-213ENST00000508385 SCN5AQ14524 2016 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 GBF1Q92538 1859 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 TANC1Q9C0D5 1861 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 PNMA6FA0A0J9YX94 578 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 EPOPA6NHQ4 379 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 GOLGA8AA7E2F4 631 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 RBAK-RBAKDNI3L0D1 243 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 CYTH3O43739 400 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 NBNO60934 754 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 PLEKHA8P1O95397 391 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 CDC27P30260 824 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 SP2Q02086 613 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 FUT2Q10981 343 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 PTK7Q13308 1070 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 CNKSR3Q6P9H4 555 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 SRBD1Q8N5C6 995 aaKnown RBP16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 SAMD3Q8N6K7 520 aa16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 CTCFLQ8NI51 663 aaPredicted RBP16.82■□□□□ 0.28
SH3BP2-213ENST00000508385 XIRP2A4UGR9 3374 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 HAS3O00219 553 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 NOP56O00567 594 aaKnown RBP16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 PPFIA4O75335 1185 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 CD2BP2O95400 341 aaKnown RBP16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 PARNO95453 639 aaKnown RBP16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 LARGE1O95461 756 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 KIF5BP33176 963 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 DEFB103AP81534 67 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 RBL2Q08999 1139 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 GPNMBQ14956 572 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 RTN1Q16799 776 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 GNPTABQ3T906 1256 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 ZNF618Q5T7W0 954 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 KRT40Q6A162 431 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 TMTC3Q6ZXV5 915 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 WNT8BQ93098 351 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 UHRF1Q96T88 793 aaPredicted RBP16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 MTCH2Q9Y6C9 303 aa16.81■□□□□ 0.28
SH3BP2-213ENST00000508385 REV3LO60673 3130 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 TGFB3P10600 412 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 HOXD8P13378 290 aaPredicted RBP16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 SMARCA1P28370 1054 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 ADD1P35611 737 aaKnown RBP16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 GNAQP50148 359 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 TFF2Q03403 129 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 ME3Q16798 604 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 SPRED2Q7Z698 418 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 CMTR1Q8N1G2 835 aaKnown RBP16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 RBM28Q9NW13 759 aaKnown RBP16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 MUC3AQ02505 3323 aa16.8■□□□□ 0.28
SH3BP2-213ENST00000508385 C17orf102A2RUQ5 167 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 PFKFB2O60825 505 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 CXCL10P02778 98 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 THPOP40225 353 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 ST3GAL1Q11201 340 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 IKBKEQ14164 716 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 HIC1Q14526 733 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 NTRK3Q16288 839 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 TCTN1Q2MV58 587 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 TRIM71Q2Q1W2 868 aaKnown RBP16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 FAM117BQ6P1L5 589 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 SMARCC2Q8TAQ2 1214 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 CUL5Q93034 780 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 RRP36Q96EU6 259 aaKnown RBP16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 C16orf70Q9BSU1 422 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 RTEL1Q9NZ71 1219 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 SEC63Q9UGP8 760 aaKnown RBP16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 MTUS1Q9ULD2 1270 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms