RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 PIK3R5Q8WYR1 880 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 MXD3Q9BW11 206 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 RTL9Q8NET4 1388 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 PRPF3O43395 683 aaKnown RBP13.94□□□□□ -0.18
DDR1-262ENST00000508312 TRAPPC3O43617 180 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 MGRN1O60291 552 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 MTIF2P46199 727 aaKnown RBP13.94□□□□□ -0.18
DDR1-262ENST00000508312 FBXO33Q7Z6M2 555 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
DDR1-262ENST00000508312 BATF3Q9NR55 127 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 C15orf41Q9Y2V0 281 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 PCDHA13Q9Y5I0 950 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 BCL9LQ86UU0 1499 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 ZNF263O14978 683 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 CAND2O75155 1236 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
DDR1-262ENST00000508312 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 LRRC15Q8TF66 581 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 RAPGEF5Q92565 580 aa13.94□□□□□ -0.18
DDR1-262ENST00000508312 H7C1D1 291 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 CYTH3O43739 400 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 RWDD2BP57060 319 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 SF3B3Q15393 1217 aaKnown RBP13.93□□□□□ -0.18
DDR1-262ENST00000508312 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 SH2D4AQ9H788 454 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 FRMPD2Q68DX3 1309 aaPredicted RBP13.93□□□□□ -0.18
DDR1-262ENST00000508312 RPN1P04843 607 aaKnown RBP13.93□□□□□ -0.18
DDR1-262ENST00000508312 TSPY3P0CV98 308 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 TSPY8P0CW00 308 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 ENOX2Q16206 610 aaKnown RBP13.93□□□□□ -0.18
DDR1-262ENST00000508312 SH3RF1Q7Z6J0 888 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 MAB21L3Q8N8X9 362 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 RUBCNQ92622 972 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 TUBGCP2Q9BSJ2 902 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 FAM207AQ9NSI2 230 aaPredicted RBP13.93□□□□□ -0.18
DDR1-262ENST00000508312 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
DDR1-262ENST00000508312 CLSTN1O94985 981 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 MAGEA1P43355 309 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 DNM2P50570 870 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 ZBED6P86452 979 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 RASSF7Q02833 373 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 ZNF658Q5TYW1 1059 aaPredicted RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 MAEAQ7L5Y9 396 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 TMC4Q7Z404 712 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 IRF2BP1Q8IU81 584 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 MDM1Q8TC05 714 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 BRIP1Q9BX63 1249 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 TMBIM4Q9HC24 238 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 GGT7Q9UJ14 662 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 PACSIN2Q9UNF0 486 aaPredicted RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 FTCDO95954 541 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 EIF4A3P38919 411 aaKnown RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 KIF11P52732 1056 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 MAGOHP61326 146 aaKnown RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 PSMD2Q13200 908 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 PTPROQ16827 1216 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 LETM2Q2VYF4 491 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 FAM196AQ6ZSG2 479 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 TNFRSF25Q93038 417 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 MAGOHBQ96A72 148 aaKnown RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 SH3BP1Q9Y3L3 701 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 TRIM37O94972 964 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 LDHBP07195 334 aaKnown RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 MEA1Q16626 185 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDR1-262ENST00000508312 CSGALNACT2Q8N6G5 542 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 CCDC197Q8NCU1 140 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 AGAP11Q8TF27 550 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 TATDN2Q93075 761 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
DDR1-262ENST00000508312 STK38LQ9Y2H1 464 aa13.92□□□□□ -0.18
DDR1-262ENST00000508312 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDR1-262ENST00000508312 MYH10P35580 1976 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 RFC4P35249 363 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 PPP2R2AP63151 447 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 KRT71Q3SY84 523 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 TDRD12Q587J7 1177 aaKnown RBP13.91□□□□□ -0.18
DDR1-262ENST00000508312 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 CCT6BQ92526 530 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 RMND1Q9NWS8 449 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 ANAPC4Q9UJX5 808 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
DDR1-262ENST00000508312 CTNND1O60716 968 aaKnown RBP13.91□□□□□ -0.18
DDR1-262ENST00000508312 HSD17B3P37058 310 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 UBA7P41226 1012 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 ITIH3Q06033 890 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 WHAMMQ8TF30 809 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 PURBQ96QR8 312 aaKnown RBP13.91□□□□□ -0.18
DDR1-262ENST00000508312 SELENOSQ9BQE4 189 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 NOC4LQ9BVI4 516 aaKnown RBP13.91□□□□□ -0.18
DDR1-262ENST00000508312 TAF1DQ9H5J8 278 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms