RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 TRAF7Q6Q0C0 670 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 INPP4AQ96PE3 977 aaPredicted RBP16.59■□□□□ 0.25
NEDD4-207ENST00000508075 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 PSTPIP2Q9H939 334 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 SETD4Q9NVD3 440 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 TMEM260Q9NX78 707 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 ADAMTS3O15072 1205 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 PPFIA4O75335 1185 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 SMIM10L2AP0DMW4 78 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 SMIM10L2BP0DMW5 78 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 ACTN1P12814 892 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.24
NEDD4-207ENST00000508075 CDC27P30260 824 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 EXOSC10Q01780 885 aaKnown RBP16.58■□□□□ 0.24
NEDD4-207ENST00000508075 TRAF1Q13077 416 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 ZBTB10Q96DT7 871 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 GPR20Q99678 358 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 KATNAL1Q9BW62 490 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 PCDHA11Q9Y5I1 949 aa16.58■□□□□ 0.24
NEDD4-207ENST00000508075 MICAL3Q7RTP6 2002 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 TCF20Q9UGU0 1960 aaKnown RBP16.57■□□□□ 0.24
NEDD4-207ENST00000508075 SIP14410 1827 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 COL4A4P53420 1690 aaPredicted RBP16.57■□□□□ 0.24
NEDD4-207ENST00000508075 KLF18A0A0U1RQI7 1052 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 H3BRB1 525 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 FIBPO43427 364 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 PFKMP08237 780 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 ITGB5P18084 799 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 MARK3P27448 753 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 ICAM3P32942 547 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 THPOP40225 353 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 GNAQP50148 359 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 WDR5P61964 334 aaKnown RBP16.57■□□□□ 0.24
NEDD4-207ENST00000508075 GNPTABQ3T906 1256 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 PCNX4Q63HM2 1172 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 HERC6Q8IVU3 1022 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 TMTC2Q8N394 836 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 SAMD3Q8N6K7 520 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 CCDC155Q8N6L0 562 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 CAGE1Q8TC20 777 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 LZTS2Q9BRK4 669 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 RNPEPQ9H4A4 650 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 TUT1Q9H6E5 874 aaKnown RBP16.57■□□□□ 0.24
NEDD4-207ENST00000508075 PCDHA6Q9UN73 950 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 PCDHA8Q9Y5H6 950 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
NEDD4-207ENST00000508075 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 UNC80Q8N2C7 3258 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 C17orf102A2RUQ5 167 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 GOLGA8AA7E2F4 631 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 CALM1P0DP23 149 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 CALM2P0DP24 149 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 CALM3P0DP25 149 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 TGFB3P10600 412 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 SMARCA1P28370 1054 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 RFC2P35250 354 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 APOBRQ0VD83 1088 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 PTK7Q13308 1070 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 RTN1Q16799 776 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.56■□□□□ 0.24
NEDD4-207ENST00000508075 DHX32Q7L7V1 743 aaKnown RBP16.56■□□□□ 0.24
NEDD4-207ENST00000508075 CYP2W1Q8TAV3 490 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 ARNTL2Q8WYA1 636 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 MTA3Q9BTC8 594 aa16.56■□□□□ 0.24
NEDD4-207ENST00000508075 FAM217BQ9NTX9 383 aaPredicted RBP16.56■□□□□ 0.24
NEDD4-207ENST00000508075 V9GY48 417 aaPredicted RBP16.56■□□□□ 0.24
NEDD4-207ENST00000508075 PRRC2BQ5JSZ5 2229 aaKnown RBP16.55■□□□□ 0.24
NEDD4-207ENST00000508075 PIK3CDO00329 1044 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 ZBTB43O43298 467 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 KCNJ6P48051 423 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 NAPAP54920 295 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 FUT2Q10981 343 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 METTL7BQ6UX53 244 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 SYNE3Q6ZMZ3 975 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 JAKMIP1Q96N16 626 aaKnown RBP16.55■□□□□ 0.24
NEDD4-207ENST00000508075 SLC9A7Q96T83 725 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 MTUS1Q9ULD2 1270 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 LOXHD1Q8IVV2 1947 aa16.55■□□□□ 0.24
NEDD4-207ENST00000508075 GSTTP1A0A1W2PQM5 241 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 TLL1O43897 1013 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 KCNA2P16389 499 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 ADD1P35611 737 aaKnown RBP16.54■□□□□ 0.24
NEDD4-207ENST00000508075 TCF7P36402 384 aaPredicted RBP16.54■□□□□ 0.24
NEDD4-207ENST00000508075 ARHGAP4P98171 946 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 TAP1Q03518 808 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 NEDD9Q14511 834 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 CNKSR3Q6P9H4 555 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 RUFY4Q6ZNE9 571 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 Q6ZUG5 572 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 NLRX1Q86UT6 975 aa16.54■□□□□ 0.24
NEDD4-207ENST00000508075 SERINC5Q86VE9 423 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms