RNA–Protein interactions for RNA: ENST00000507487.5

CAST-218, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-218ENST00000507487 CYFIP1Q7L576 1253 aa13.33□□□□□ -0.28
CAST-218ENST00000507487 DHX37Q8IY37 1157 aaKnown RBP13.33□□□□□ -0.28
CAST-218ENST00000507487 HAS1Q92839 578 aa13.33□□□□□ -0.28
CAST-218ENST00000507487 COPS5Q92905 334 aa13.33□□□□□ -0.28
CAST-218ENST00000507487 USP28Q96RU2 1077 aa13.33□□□□□ -0.28
CAST-218ENST00000507487 TMEM60Q9H2L4 133 aa13.33□□□□□ -0.28
CAST-218ENST00000507487 MLXIPQ9HAP2 919 aa13.33□□□□□ -0.28
CAST-218ENST00000507487 PAK6Q9NQU5 681 aaPredicted RBP13.33□□□□□ -0.28
CAST-218ENST00000507487 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.28
CAST-218ENST00000507487 CLIC4Q9Y696 253 aa13.33□□□□□ -0.28
CAST-218ENST00000507487 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 GAS7O60861 476 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 PSMD10O75832 226 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 PRPHP41219 470 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 TXKP42681 527 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 NASPP49321 788 aaPredicted RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 ATP2C1P98194 919 aaPredicted RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 DNM1Q05193 864 aaKnown RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 ARHGAP1Q07960 439 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 TLK2Q86UE8 772 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 OR6J1Q8NGC5 347 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 GJA10Q969M2 543 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 EMID1Q96A84 441 aaPredicted RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 TEKT3Q9BXF9 490 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 RNF208Q9H0X6 261 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 SPC25Q9HBM1 224 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 JPH1Q9HDC5 661 aaPredicted RBP13.32□□□□□ -0.28
CAST-218ENST00000507487 SLC9A2Q9UBY0 812 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 TCEAL9Q9UHQ7 104 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 TCHHQ07283 1943 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 HTTP42858 3142 aa13.32□□□□□ -0.28
CAST-218ENST00000507487 DDX39AO00148 427 aaKnown RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 YEATS4O95619 227 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 GJA9P57773 515 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 KRT85P78386 507 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 KRT76Q01546 638 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 STK38Q15208 465 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 PTPAQ15257 358 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 BRDTQ58F21 947 aaPredicted RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 ARL6IP4Q66PJ3 421 aaKnown RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 LHX8Q68G74 356 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
CAST-218ENST00000507487 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
CAST-218ENST00000507487 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
CAST-218ENST00000507487 NOP56O00567 594 aaKnown RBP13.3□□□□□ -0.28
CAST-218ENST00000507487 SORBS3O60504 671 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
CAST-218ENST00000507487 NKX3-2P78367 333 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 PPP2R5CQ13362 524 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 TMEM266Q2M3C6 531 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 ZNF746Q6NUN9 644 aaPredicted RBP13.3□□□□□ -0.28
CAST-218ENST00000507487 DTHD1Q6ZMT9 781 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 LINC00301Q8NCQ3 95 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
CAST-218ENST00000507487 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 SPATA33Q96N06 139 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 DEFB118Q96PH6 123 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
CAST-218ENST00000507487 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
CAST-218ENST00000507487 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 A6NJR5 290 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 SPTLC2O15270 562 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 PPP6R2O75170 966 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 GJB1P08034 283 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 C6orf222P0C671 652 aaPredicted RBP13.29□□□□□ -0.28
CAST-218ENST00000507487 PTGS1P23219 599 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 SFNP31947 248 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 TECP42680 631 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 CPT1AP50416 773 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.285e-6■□□□□ 9.5
CAST-218ENST00000507487 ACTR2P61160 394 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 PDIA5Q14554 519 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 FSCN1Q16658 493 aaKnown RBP13.29□□□□□ -0.28
CAST-218ENST00000507487 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 COL13A1Q5TAT6 717 aaPredicted RBP13.29□□□□□ -0.28
CAST-218ENST00000507487 B3GNT9Q6UX72 402 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 SMAP1Q8IYB5 467 aaPredicted RBP13.29□□□□□ -0.28
CAST-218ENST00000507487 ARRDC4Q8NCT1 418 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 RDM1Q8NG50 284 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 PPTC7Q8NI37 304 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 AFG1LQ8WV93 481 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 SEPT1Q8WYJ6 367 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 GPR20Q99678 358 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 RAB34Q9BZG1 259 aa13.29□□□□□ -0.28
CAST-218ENST00000507487 SCAND2PQ9GZW5 306 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms