RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 HTTP42858 3142 aa11.34□□□□□ -0.59
NDUFS4-204ENST00000506974 CYP3A7-CYP3A51PA0A087WV96 503 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 TDP2O95551 362 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 FCER1AP12319 257 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 CYP3A7P24462 503 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 CTGFP29279 349 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 CIITAP33076 1130 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 USP11P51784 963 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 CNTN2Q02246 1040 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 PGM5Q15124 567 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 SF3A1Q15459 793 aaKnown RBP11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 LETM2Q2VYF4 491 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 PPP4R3AQ6IN85 833 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 GPR142Q7Z601 462 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 C4orf32Q8N8J7 132 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 DNERQ8NFT8 737 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 LEO1Q8WVC0 666 aaPredicted RBP11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 EHMT1Q9H9B1 1298 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 RCOR1Q9UKL0 485 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 CFAP45Q9UL16 551 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 CENPFP49454 3210 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 LOXHD1Q8IVV2 1947 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 ELP1O95163 1332 aa11.33□□□□□ -0.6
NDUFS4-204ENST00000506974 MYH9P35579 1960 aaKnown RBP11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 IGLV3-22A0A075B6J6 115 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 FIBPO43427 364 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 STRNO43815 780 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 SLC37A4O43826 429 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 RNF40O75150 1001 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 GCFC2P16383 781 aaKnown RBP11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 ATP2B1P20020 1258 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 EDNRBP24530 442 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 HOXD10P28358 340 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 UBXN2AP68543 259 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 CEBPZQ03701 1054 aaKnown RBP11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 KCTD2Q14681 263 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 SLC39A14Q15043 492 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 ZNF174Q15697 407 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 MORN1Q5T089 497 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 WDR78Q5VTH9 848 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 PCNX4Q63HM2 1172 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 NSUN6Q8TEA1 469 aaKnown RBP11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 LENG9Q96B70 501 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 SCAND2PQ9GZW5 306 aaPredicted RBP11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 GDPD2Q9HCC8 539 aa11.32□□□□□ -0.6
NDUFS4-204ENST00000506974 SLC15A5A6NIM6 579 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 FAM86B1E9PN63 330 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 CCNT1O60563 726 aaKnown RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 COBLO75128 1261 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 PGK2P07205 417 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 FAM86B2P0C5J1 330 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 NCLP19338 710 aaKnown RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 ADORA2AP29274 412 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 MCM7P33993 719 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 CAP1Q01518 475 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 GUCA2AQ02747 115 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 ZNF792Q3KQV3 632 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 ARHGEF16Q5VV41 709 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 OTOP1Q7RTM1 612 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 USP6NLQ92738 828 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 IWS1Q96ST2 819 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 NAP1L4Q99733 375 aaKnown RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 TMEM60Q9H2L4 133 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 TRIM17Q9Y577 477 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 MRVI1Q9Y6F6 885 aa11.31□□□□□ -0.6
NDUFS4-204ENST00000506974 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 LOC102724159A0A0B4J2E5 919 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 SPTLC2O15270 562 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 ACTN4O43707 911 aaKnown RBP11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 NEMFO60524 1076 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 PPP6R2O75170 966 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 BMP15O95972 392 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 NR3C2P08235 984 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 MCM4P33991 863 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 RGS19P49795 217 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 STK38Q15208 465 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 PWP2Q15269 919 aaKnown RBP11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 Q4G0T1 1027 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 XRRA1Q6P2D8 792 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 NIPA1Q7RTP0 329 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
NDUFS4-204ENST00000506974 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms