RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 EPC2Q52LR7 807 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 TCEAL5Q5H9L2 206 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 MYSM1Q5VVJ2 828 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 ALYREFQ86V81 257 aaKnown RBP9.56□□□□□ -0.88
SNF8-204ENST00000506104 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.56□□□□□ -0.88
SNF8-204ENST00000506104 YTHDC1Q96MU7 727 aaKnown RBP9.56□□□□□ -0.88
SNF8-204ENST00000506104 PIGSQ96S52 555 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 TUT1Q9H6E5 874 aaKnown RBP9.56□□□□□ -0.88
SNF8-204ENST00000506104 CNNM2Q9H8M5 875 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 SETD4Q9NVD3 440 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 LOXHD1Q8IVV2 1947 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 RALGAPA2Q2PPJ7 1873 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 MYO7AQ13402 2215 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 HAS3O00219 553 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 HIP1O00291 1037 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
SNF8-204ENST00000506104 ZBTB5O15062 677 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 GPR37L1O60883 481 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 PPFIA4O75335 1185 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 HSD17B4P51659 736 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 SP2Q02086 613 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 TRIM71Q2Q1W2 868 aaKnown RBP9.55□□□□□ -0.88
SNF8-204ENST00000506104 GNPTABQ3T906 1256 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 TIGD5Q53EQ6 642 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 CYFIP1Q7L576 1253 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 SERINC5Q86VE9 423 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 FAM178BQ8IXR5 827 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 TMEM192Q8IY95 271 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 SMARCC2Q8TAQ2 1214 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 SPOCK2Q92563 424 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 CUL5Q93034 780 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
SNF8-204ENST00000506104 MRPL38Q96DV4 380 aaKnown RBP9.55□□□□□ -0.88
SNF8-204ENST00000506104 BCAS3Q9H6U6 928 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 PKD2L1Q9P0L9 805 aa9.55□□□□□ -0.88
SNF8-204ENST00000506104 VCANP13611 3396 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 PI4K2BG5E9Z4 385 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
SNF8-204ENST00000506104 RGS20O76081 388 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 GNAT1P11488 350 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 ALADP13716 330 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 MARK3P27448 753 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 IGBP1P78318 339 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 RBL2Q08999 1139 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
SNF8-204ENST00000506104 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 CYB5R4Q7L1T6 521 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 RALYLQ86SE5 291 aaKnown RBP9.54□□□□□ -0.88
SNF8-204ENST00000506104 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 CHD1LQ86WJ1 897 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 FIBCD1Q8N539 461 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 C16orf70Q9BSU1 422 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 RNPEPQ9H4A4 650 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 NSUN3Q9H649 340 aaKnown RBP9.54□□□□□ -0.88
SNF8-204ENST00000506104 C11orf16Q9NQ32 467 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 ZNF215Q9UL58 517 aaPredicted RBP9.54□□□□□ -0.88
SNF8-204ENST00000506104 FAM50BQ9Y247 325 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 SUPT16HQ9Y5B9 1047 aaKnown RBP9.54□□□□□ -0.88
SNF8-204ENST00000506104 BDP1A6H8Y1 2624 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
SNF8-204ENST00000506104 ATG2AQ2TAZ0 1938 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.53□□□□□ -0.88
SNF8-204ENST00000506104 GRXCR2A6NFK2 248 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 OPLAHO14841 1288 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 GHRP10912 638 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 TRAF1Q13077 416 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 NEDD9Q14511 834 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 WTAPQ15007 396 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 PUS10Q3MIT2 529 aaKnown RBP9.53□□□□□ -0.88
SNF8-204ENST00000506104 PLEKHG4Q58EX7 1191 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 RPAINQ86UA6 219 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 ANKS1AQ92625 1134 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 IL17RAQ96F46 866 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 SAMD11Q96NU1 681 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 DSCC1Q9BVC3 393 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 OSBPL7Q9BZF2 842 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 MAD2L2Q9UI95 211 aa9.53□□□□□ -0.88
SNF8-204ENST00000506104 PRR33A8MZF0 331 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 H3BNC9 293 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 DCXO43602 365 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 TGFB3P10600 412 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 HTRA4P83105 476 aaPredicted RBP9.52□□□□□ -0.89
SNF8-204ENST00000506104 BTG3Q14201 252 aaPredicted RBP9.52□□□□□ -0.89
SNF8-204ENST00000506104 GRM4Q14833 912 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 SART3Q15020 963 aaKnown RBP9.52□□□□□ -0.89
SNF8-204ENST00000506104 PAN2Q504Q3 1202 aaKnown RBP9.52□□□□□ -0.89
SNF8-204ENST00000506104 NFXL1Q6ZNB6 911 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 STOX1Q6ZVD7 989 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 RSPH3Q86UC2 560 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 GLG1Q92896 1179 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 TOP1MTQ969P6 601 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 USP26Q9BXU7 913 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 MAF1Q9H063 256 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 FAM49AQ9H0Q0 323 aaPredicted RBP9.52□□□□□ -0.89
SNF8-204ENST00000506104 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms