RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PLCG2P16885 1265 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 HOXB8P17481 243 aaPredicted RBP4.11□□□□□ -1.75
TCOF1-208ENST00000506063 TIMM10P62072 90 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 PTK7Q13308 1070 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 TWISTNBQ3B726 338 aaPredicted RBP4.11□□□□□ -1.75
TCOF1-208ENST00000506063 FAM83BQ5T0W9 1011 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 KANK3Q6NY19 840 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 ATF7IPQ6VMQ6 1270 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 KIAA1211Q6ZU35 1233 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 TMEFF1Q8IYR6 380 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 ANKRD35Q8N283 1001 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 TDRD5Q8NAT2 981 aaKnown RBP4.11□□□□□ -1.75
TCOF1-208ENST00000506063 COPS5Q92905 334 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 SECISBP2LQ93073 1101 aaKnown RBP4.11□□□□□ -1.75
TCOF1-208ENST00000506063 RUNDC1Q96C34 613 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 NECTIN4Q96NY8 510 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 SCNM1Q9BWG6 230 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 CHMP4AQ9BY43 222 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 WDR11Q9BZH6 1224 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 SLC38A10Q9HBR0 1119 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 RAVER2Q9HCJ3 691 aaKnown RBP4.11□□□□□ -1.75
TCOF1-208ENST00000506063 CABP5Q9NP86 173 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 PRMT8Q9NR22 394 aaPredicted RBP4.11□□□□□ -1.75
TCOF1-208ENST00000506063 CYP26B1Q9NR63 512 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 HDAC6Q9UBN7 1215 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 GMEB2Q9UKD1 530 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 NOD1Q9Y239 953 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 SIT1Q9Y3P8 196 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 RAI2Q9Y5P3 530 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 EMSYQ7Z589 1322 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 NUP205Q92621 2012 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 TSC2P49815 1807 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 HIDE1A8MVS5 230 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 USP17L12C9JPN9 530 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 USP17L21D6R901 530 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 HAS3O00219 553 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 KPNA6O60684 536 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 N4BP1O75113 896 aaKnown RBP4.1□□□□□ -1.75
TCOF1-208ENST00000506063 ARIH2O95376 493 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 RETP07949 1114 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 AKR1B1P15121 316 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 ARID4AP29374 1257 aaPredicted RBP4.1□□□□□ -1.75
TCOF1-208ENST00000506063 HOXC8P31273 242 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 CSTF1Q05048 431 aaKnown RBP4.1□□□□□ -1.75
TCOF1-208ENST00000506063 ICA1Q05084 483 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 ITIH3Q06033 890 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 C19orf57Q0VDD7 668 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 TRIM26Q12899 539 aaPredicted RBP4.1□□□□□ -1.75
TCOF1-208ENST00000506063 FOXC1Q12948 553 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 LPAL2Q16609 132 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 LAIR1Q6GTX8 287 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 KIAA1841Q6NSI8 718 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 PSAPL1Q6NUJ1 521 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 TSSK4Q6SA08 328 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 TMEM179Q6ZVK1 233 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 SERINC5Q86VE9 423 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 PLCD3Q8N3E9 789 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 SPATA5Q8NB90 893 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 CHST13Q8NET6 341 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 OR6J1Q8NGC5 347 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 ATRIPQ8WXE1 791 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 RSAD2Q8WXG1 361 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 LINC01599Q8WXQ3 324 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 XAGE2Q96GT9 111 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 NUP88Q99567 741 aaPredicted RBP4.1□□□□□ -1.75
TCOF1-208ENST00000506063 SLF1Q9BQI6 1058 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 DDX23Q9BUQ8 820 aaKnown RBP4.1□□□□□ -1.75
TCOF1-208ENST00000506063 RAI14Q9P0K7 980 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 FBXL21Q9UKT6 434 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 CA14Q9ULX7 337 aa4.1□□□□□ -1.75
TCOF1-208ENST00000506063 MTF2Q9Y483 593 aaPredicted RBP4.1□□□□□ -1.75
TCOF1-208ENST00000506063 PTPRBP23467 1997 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 FSD2A1L4K1 749 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 RSPH10B2B2RC85 870 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 BAG3O95817 575 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 RSPH10BP0C881 870 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 EEF2P13639 858 aaKnown RBP4.09□□□□□ -1.75
TCOF1-208ENST00000506063 MTHFRP42898 656 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 STARD6P59095 220 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 TROAPQ12815 778 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 FZD5Q13467 585 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 BTG3Q14201 252 aaPredicted RBP4.09□□□□□ -1.75
TCOF1-208ENST00000506063 IL31Q6EBC2 164 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 NAA16Q6N069 864 aaPredicted RBP4.09□□□□□ -1.75
TCOF1-208ENST00000506063 LLGL2Q6P1M3 1020 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 SLC4A10Q6U841 1118 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 RASGRP2Q7LDG7 609 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 CMTR2Q8IYT2 770 aaKnown RBP4.09□□□□□ -1.75
TCOF1-208ENST00000506063 CPXCR1Q8N123 301 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 C12orf76Q8N812 135 aaPredicted RBP4.09□□□□□ -1.75
TCOF1-208ENST00000506063 GPR152Q8TDT2 470 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 SEPT8Q92599 483 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.09□□□□□ -1.75
TCOF1-208ENST00000506063 SRCIN1Q9C0H9 1055 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 GPHNQ9NQX3 736 aaPredicted RBP4.09□□□□□ -1.75
TCOF1-208ENST00000506063 ARHGEF3Q9NR81 526 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 CEP126Q9P2H0 1117 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 FBXO40Q9UH90 709 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 FBXO3Q9UK99 471 aa4.09□□□□□ -1.75
TCOF1-208ENST00000506063 HCFC2Q9Y5Z7 792 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms