RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 CYFIP1Q7L576 1253 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 USP26Q9BXU7 913 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 XIRP2A4UGR9 3374 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 PIK3CDO00329 1044 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 EFCAB14O75071 495 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 ARHGEF15O94989 841 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 PLEKHA8P1O95397 391 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 CALM1P0DP23 149 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 CALM2P0DP24 149 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 CALM3P0DP25 149 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 THPOP40225 353 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 DEFB103AP81534 67 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 TMCO2Q7Z6W1 182 aaPredicted RBP28.44■■■□□ 2.14
HERC4-212ENST00000505760 SERINC5Q86VE9 423 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 IL27Q8NEV9 243 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 ATP6V0A1Q93050 837 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 ANO2Q9NQ90 1003 aa28.44■■■□□ 2.14
HERC4-212ENST00000505760 EMSYQ7Z589 1322 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 EPOPA6NHQ4 379 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 RXRAP19793 462 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 SKIV2LQ15477 1246 aaKnown RBP28.43■■■□□ 2.14
HERC4-212ENST00000505760 PCNX4Q63HM2 1172 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 CREB3L3Q68CJ9 461 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 XRRA1Q6P2D8 792 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 TRAF7Q6Q0C0 670 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 CMTR1Q8N1G2 835 aaKnown RBP28.43■■■□□ 2.14
HERC4-212ENST00000505760 SRBD1Q8N5C6 995 aaKnown RBP28.43■■■□□ 2.14
HERC4-212ENST00000505760 MTCH2Q9Y6C9 303 aa28.43■■■□□ 2.14
HERC4-212ENST00000505760 MEIS2O14770 477 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 SMIM10L2AP0DMW4 78 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 SMIM10L2BP0DMW5 78 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 LIFRP42702 1097 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 SEMA3FQ13275 785 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 MBTPS1Q14703 1052 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 TCTN1Q2MV58 587 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 SLC12A7Q9Y666 1083 aa28.42■■■□□ 2.14
HERC4-212ENST00000505760 RSPH10B2B2RC85 870 aa28.41■■■□□ 2.14
HERC4-212ENST00000505760 LGR5O75473 907 aa28.41■■■□□ 2.14
HERC4-212ENST00000505760 RSPH10BP0C881 870 aa28.41■■■□□ 2.14
HERC4-212ENST00000505760 POU3F3P20264 500 aaPredicted RBP28.41■■■□□ 2.14
HERC4-212ENST00000505760 NLRX1Q86UT6 975 aa28.41■■■□□ 2.14
HERC4-212ENST00000505760 GPR20Q99678 358 aa28.41■■■□□ 2.14
HERC4-212ENST00000505760 PSTPIP2Q9H939 334 aa28.41■■■□□ 2.14
HERC4-212ENST00000505760 LCHNA4D1U4 455 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 GJB5O95377 273 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 SP4Q02446 784 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 COL9A3Q14050 684 aaPredicted RBP28.4■■■□□ 2.14
HERC4-212ENST00000505760 NECTIN1Q15223 517 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 RAD9AQ99638 391 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 SENP7Q9BQF6 1050 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 LRRC2Q9BYS8 371 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 RNPEPQ9H4A4 650 aa28.4■■■□□ 2.14
HERC4-212ENST00000505760 ZNF215Q9UL58 517 aaPredicted RBP28.4■■■□□ 2.14
HERC4-212ENST00000505760 TNFRSF10AO00220 468 aa28.39■■■□□ 2.14
HERC4-212ENST00000505760 TREHO43280 583 aa28.39■■■□□ 2.14
HERC4-212ENST00000505760 HOXC8P31273 242 aa28.39■■■□□ 2.14
HERC4-212ENST00000505760 RAB11FIP4Q86YS3 637 aa28.39■■■□□ 2.14
HERC4-212ENST00000505760 CCDC82Q8N4S0 544 aa28.39■■■□□ 2.14
HERC4-212ENST00000505760 KAT6AQ92794 2004 aa28.39■■■□□ 2.14
HERC4-212ENST00000505760 GNAT1P11488 350 aa28.38■■■□□ 2.13
HERC4-212ENST00000505760 UTP14CQ5TAP6 766 aaKnown RBP28.38■■■□□ 2.13
HERC4-212ENST00000505760 FAM117BQ6P1L5 589 aa28.38■■■□□ 2.13
HERC4-212ENST00000505760 TRIM50Q86XT4 487 aa28.38■■■□□ 2.13
HERC4-212ENST00000505760 FANCBQ8NB91 859 aa28.38■■■□□ 2.13
HERC4-212ENST00000505760 GIMAP8Q8ND71 665 aaPredicted RBP28.38■■■□□ 2.13
HERC4-212ENST00000505760 ADAMTS19Q8TE59 1207 aa28.38■■■□□ 2.13
HERC4-212ENST00000505760 NCOR1O75376 2440 aa28.38■■■□□ 2.13
HERC4-212ENST00000505760 MICAL3Q7RTP6 2002 aa28.37■■■□□ 2.13
HERC4-212ENST00000505760 hCG_1642624A0A1W2PR95 340 aa28.37■■■□□ 2.13
HERC4-212ENST00000505760 RNF20Q5VTR2 975 aa28.37■■■□□ 2.13
HERC4-212ENST00000505760 KRT40Q6A162 431 aa28.37■■■□□ 2.13
HERC4-212ENST00000505760 SPRED2Q7Z698 418 aa28.37■■■□□ 2.13
HERC4-212ENST00000505760 DBF4BQ8NFT6 615 aa28.37■■■□□ 2.13
HERC4-212ENST00000505760 SETD4Q9NVD3 440 aa28.37■■■□□ 2.13
HERC4-212ENST00000505760 COL4A4P53420 1690 aaPredicted RBP28.36■■■□□ 2.13
HERC4-212ENST00000505760 GRB10Q13322 594 aa28.36■■■□□ 2.13
HERC4-212ENST00000505760 AAK1Q2M2I8 961 aa28.36■■■□□ 2.13
HERC4-212ENST00000505760 SYNE3Q6ZMZ3 975 aa28.36■■■□□ 2.13
HERC4-212ENST00000505760 TMTC3Q6ZXV5 915 aa28.36■■■□□ 2.13
HERC4-212ENST00000505760 MICU3Q86XE3 530 aa28.36■■■□□ 2.13
HERC4-212ENST00000505760 GPRASP2Q96D09 838 aa28.36■■■□□ 2.13
HERC4-212ENST00000505760 CDHR1Q96JP9 859 aa28.36■■■□□ 2.13
HERC4-212ENST00000505760 SPDYE3A6NKU9 549 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 RBAK-RBAKDNI3L0D1 243 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 CAND2O75155 1236 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 AMHP03971 560 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 CTSHP09668 335 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 TFF2Q03403 129 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 BMP2KLQ5H9B9 411 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 MTUS1Q9ULD2 1270 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 TELO2Q9Y4R8 837 aa28.35■■■□□ 2.13
HERC4-212ENST00000505760 TCF20Q9UGU0 1960 aaKnown RBP28.35■■■□□ 2.13
HERC4-212ENST00000505760 UBE2SQ16763 222 aa28.34■■■□□ 2.13
HERC4-212ENST00000505760 PLEKHG4Q58EX7 1191 aa28.34■■■□□ 2.13
HERC4-212ENST00000505760 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.34■■■□□ 2.13
HERC4-212ENST00000505760 HEATR3Q7Z4Q2 680 aa28.34■■■□□ 2.13
HERC4-212ENST00000505760 SGMS1Q86VZ5 419 aa28.34■■■□□ 2.13
HERC4-212ENST00000505760 UHRF1Q96T88 793 aaPredicted RBP28.34■■■□□ 2.13
HERC4-212ENST00000505760 BDP1A6H8Y1 2624 aa28.34■■■□□ 2.13
HERC4-212ENST00000505760 ARHGAP4P98171 946 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms