RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SSBP05455 408 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRAPPC11-204ENST00000505676 EDRF1Q3B7T1 1238 aa19.18■□□□□ 0.66
TRAPPC11-204ENST00000505676 CDAN1Q8IWY9 1227 aa19.18■□□□□ 0.66
TRAPPC11-204ENST00000505676 ERO1AQ96HE7 468 aa19.18■□□□□ 0.66
TRAPPC11-204ENST00000505676 RIT2Q99578 217 aa19.18■□□□□ 0.66
TRAPPC11-204ENST00000505676 PSMD10O75832 226 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 SPATA31C1P0DKV0 1188 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 GAP43P17677 238 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 PTPN21Q16825 1174 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZCWPW2Q504Y3 356 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 LRCH2Q5VUJ6 765 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 TRIM65Q6PJ69 517 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 SYT10Q6XYQ8 523 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 EDEM3Q9BZQ6 932 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZNF112Q9UJU3 913 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 ADGRG1Q9Y653 693 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 RPTORQ8N122 1335 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 RRP9O43818 475 aaKnown RBP19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 SLU7O95391 586 aaKnown RBP19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 MARSP56192 900 aaKnown RBP19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 CDK17Q00537 523 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 VWA3BQ502W6 1294 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 CPLX3Q8WVH0 158 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 EIF2AK1Q9BQI3 630 aaKnown RBP19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZNHIT6Q9NWK9 470 aaKnown RBP19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 MYO1AQ9UBC5 1043 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 HACL1Q9UJ83 578 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 PCDHA2Q9Y5H9 948 aa19.17■□□□□ 0.66
TRAPPC11-204ENST00000505676 B4DLN1 442 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 MEIS1O00470 390 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 PES1O00541 588 aaKnown RBP19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 STAT3P40763 770 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 PRELPP51888 382 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZBED6P86452 979 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 TUBB2AQ13885 445 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZYXQ15942 572 aaKnown RBP19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 HERC4Q5GLZ8 1057 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 LRRC55Q6ZSA7 311 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 TOGARAM2Q6ZUX3 1019 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 OTOP1Q7RTM1 612 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZC3H3Q8IXZ2 948 aaKnown RBP19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 TUBB2BQ9BVA1 445 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 SLC38A10Q9HBR0 1119 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 POTEFA5A3E0 1075 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 POTEIP0CG38 1075 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 MIIPQ5JXC2 388 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 POTEGQ6S5H5 508 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 POTEEQ6S8J3 1075 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 SCYL3Q8IZE3 742 aa19.16■□□□□ 0.66
TRAPPC11-204ENST00000505676 SOWAHDA6NJG2 315 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 GAS7O60861 476 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 TRIM21P19474 475 aaKnown RBP19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 PPP2R3AQ06190 1150 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 MEA1Q16626 185 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 GJA10Q969M2 543 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 HSD17B14Q9BPX1 270 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 TEKT3Q9BXF9 490 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 TTYH3Q9C0H2 523 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 PPP1R9AQ9ULJ8 1098 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 CTDP1Q9Y5B0 961 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 COL4A3BPQ9Y5P4 624 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 FRMPD4Q14CM0 1322 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 DOCK1Q14185 1865 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZBED4O75132 1171 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 EPHA7Q15375 998 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 C12orf42Q96LP6 360 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 MXRA8Q9BRK3 442 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 GLIS2Q9BZE0 524 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 NDST4Q9H3R1 872 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 SEL1LQ9UBV2 794 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 PPP1R1BQ9UD71 204 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 DNAI1Q9UI46 699 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 FAM184BQ9ULE4 1060 aa19.15■□□□□ 0.66
TRAPPC11-204ENST00000505676 ZNF536O15090 1300 aa19.14■□□□□ 0.66
TRAPPC11-204ENST00000505676 TTC26A0AVF1 554 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 INPP5BP32019 993 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 GIT2Q14161 759 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 BMT2Q1RMZ1 405 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 XRRA1Q6P2D8 792 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 RAD9BQ6WBX8 426 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 ZNF662Q6ZS27 426 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 CCDC170Q8IYT3 715 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 HPS3Q969F9 1004 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 EMILIN3Q9NT22 766 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 FBXO28Q9NVF7 368 aa19.14■□□□□ 0.65
TRAPPC11-204ENST00000505676 UBE4BO95155 1302 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 KIF5CO60282 957 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 TBCAO75347 108 aaKnown RBP19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 CASQ1P31415 396 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 OAZ1P54368 228 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 ARSHQ5FYA8 562 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 NACC1Q96RE7 527 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 ZNF577Q9BSK1 485 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 OLFML3Q9NRN5 406 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 GJA3Q9Y6H8 435 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 SHTN1A0MZ66 631 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 C19orf81C9J6K1 198 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 PCNX4Q63HM2 1172 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 STXBP4Q6ZWJ1 553 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms