RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 KCNH3Q9ULD8 1083 aa10.55□□□□□ -0.72
TPM3-218ENST00000505010 HPSEQ9Y251 543 aa10.55□□□□□ -0.72
TPM3-218ENST00000505010 DOCK5Q9H7D0 1870 aa10.55□□□□□ -0.72
TPM3-218ENST00000505010 PFASO15067 1338 aa10.55□□□□□ -0.72
TPM3-218ENST00000505010 PP2D1A8MPX8 630 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 ZNF202O95125 648 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 SLC25A27O95847 323 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 MYCLP12524 364 aaPredicted RBP10.54□□□□□ -0.72
TPM3-218ENST00000505010 ERCC3P19447 782 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 CIITAP33076 1130 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 TECP42680 631 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 GCLCP48506 637 aaPredicted RBP10.54□□□□□ -0.72
TPM3-218ENST00000505010 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 ERVK-24P63145 666 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 MDM2Q00987 491 aaPredicted RBP10.54□□□□□ -0.72
TPM3-218ENST00000505010 SETQ01105 290 aaPredicted RBP10.54□□□□□ -0.72
TPM3-218ENST00000505010 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 PLA2G4DQ86XP0 818 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 PDILTQ8N807 584 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 GJA10Q969M2 543 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 LENG9Q96B70 501 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
TPM3-218ENST00000505010 RAB34Q9BZG1 259 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 MAF1Q9H063 256 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 CDH23Q9H251 3354 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 CYP39A1Q9NYL5 469 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 OGDHLQ9ULD0 1010 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 MCM3APO60318 1980 aa10.54□□□□□ -0.72
TPM3-218ENST00000505010 IGLV3-22A0A075B6J6 115 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
TPM3-218ENST00000505010 POTEMA6NI47 508 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 CTAGE5O15320 804 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
TPM3-218ENST00000505010 LETM1O95202 739 aaPredicted RBP10.53□□□□□ -0.72
TPM3-218ENST00000505010 CCND2P30279 289 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 UBA7P41226 1012 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.725e-7■■■□□ 17.1
TPM3-218ENST00000505010 CCNA1P78396 465 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 PGM5Q15124 567 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 ZRSR1Q15695 479 aaKnown RBP10.53□□□□□ -0.72
TPM3-218ENST00000505010 FAM110CQ1W6H9 321 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 CEP55Q53EZ4 464 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 PCNX4Q63HM2 1172 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 SLFN12Q8IYM2 578 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 GPRC5AQ8NFJ5 357 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 CYP2W1Q8TAV3 490 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 ETNPPLQ8TBG4 499 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 HAS1Q92839 578 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 DHX58Q96C10 678 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 AK8Q96MA6 479 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 MMP19Q99542 508 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 PDCD2LQ9BRP1 358 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 MROH8Q9H579 483 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 TTC12Q9H892 705 aaPredicted RBP10.53□□□□□ -0.72
TPM3-218ENST00000505010 KCNMB3Q9NPA1 279 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 ZNF236Q9UL36 1845 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 DNAH12Q6ZR08 3092 aa10.53□□□□□ -0.72
TPM3-218ENST00000505010 DOCK3Q8IZD9 2030 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 A0A087X0B3 334 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 TBX3O15119 743 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 MSH4O15457 936 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 COL9A1P20849 921 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 CDC25AP30304 524 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 ZNF445P59923 1031 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 KCTD2Q14681 263 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 KARSQ15046 597 aaKnown RBP10.52□□□□□ -0.73
TPM3-218ENST00000505010 Q3C1V9 767 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 KRBA2Q6ZNG9 492 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 CABP7Q86V35 215 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 CKAP2LQ8IYA6 745 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 SHCBP1Q8NEM2 672 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 MAFAQ8NHW3 353 aaPredicted RBP10.52□□□□□ -0.73
TPM3-218ENST00000505010 NSUN6Q8TEA1 469 aaKnown RBP10.52□□□□□ -0.73
TPM3-218ENST00000505010 TIGD1Q96MW7 591 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 CDX2Q99626 313 aaPredicted RBP10.52□□□□□ -0.73
TPM3-218ENST00000505010 LBHD1Q9BQE6 289 aaPredicted RBP10.52□□□□□ -0.73
TPM3-218ENST00000505010 MXRA8Q9BRK3 442 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 SDF4Q9BRK5 362 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 PYM1Q9BRP8 204 aaKnown RBP10.52□□□□□ -0.73
TPM3-218ENST00000505010 PORCNQ9H237 461 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 PKD2L1Q9P0L9 805 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 MORF4L1Q9UBU8 362 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 LRWD1Q9UFC0 647 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 CCDC39Q9UFE4 941 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 WDR81Q562E7 1941 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 LOXHD1Q8IVV2 1947 aa10.52□□□□□ -0.73
TPM3-218ENST00000505010 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
TPM3-218ENST00000505010 STAT6P42226 847 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 MRPS9P82933 396 aaKnown RBP10.51□□□□□ -0.73
TPM3-218ENST00000505010 CNTN2Q02246 1040 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 TRIM32Q13049 653 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 LRCH2Q5VUJ6 765 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 NCAPH2Q6IBW4 605 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 XRRA1Q6P2D8 792 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 NIPA1Q7RTP0 329 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 CEP57L1Q8IYX8 460 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 IGSF22Q8N9C0 903 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms