RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 MRPL11Q9Y3B7 192 aaKnown RBP8.04□□□□□ -1.12
NPIPB3-203ENST00000504841 CCDC171Q6TFL3 1326 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 POTEB3A0JP26 581 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 TRIM6-TRIM34B2RNG4 842 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 TREHO43280 583 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 SMIM10L2AP0DMW4 78 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 SMIM10L2BP0DMW5 78 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 UBA1P22314 1058 aaKnown RBP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 HOXA13P31271 388 aaPredicted RBP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 DLX2Q07687 328 aaPredicted RBP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 NMIQ13287 307 aaPredicted RBP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 MCMDC2Q4G0Z9 681 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 CELF3Q5SZQ8 465 aaKnown RBP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 POTEBQ6S5H4 581 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 FIBCD1Q8N539 461 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 IL31RAQ8NI17 732 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 POP1Q99575 1024 aaKnown RBP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 RNF41Q9H4P4 317 aaPredicted RBP8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 IGFLR1Q9H665 355 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 MLXIPQ9HAP2 919 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 PCDHB8Q9UN66 801 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 REV3LO60673 3130 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 MYH7BA7E2Y1 1941 aa8.03□□□□□ -1.12
NPIPB3-203ENST00000504841 NLRC5Q86WI3 1866 aa8.02□□□□□ -1.12
NPIPB3-203ENST00000504841 MYH6P13533 1939 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 B4E1Z4 1266 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 NOP56O00567 594 aaKnown RBP8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 GRM6O15303 877 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 MBTPS2O43462 519 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 KDM4AO75164 1064 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 TBX10O75333 385 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 PPFIA4O75335 1185 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 RGS20O76081 388 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 LGALS2P05162 132 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 PARP1P09874 1014 aaKnown RBP8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 GTF2F1P35269 517 aaKnown RBP eCLIP8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 SP4Q02446 784 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 HYAL1Q12794 435 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 ASPRV1Q53RT3 343 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 UTP14CQ5TAP6 766 aaKnown RBP8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 ANKRD45Q5TZF3 282 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 MYSM1Q5VVJ2 828 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 FCHSD1Q86WN1 690 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 IQCA1Q86XH1 822 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 TRIM50Q86XT4 487 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 RNF135Q8IUD6 432 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 TOP1MTQ969P6 601 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 IL17RAQ96F46 866 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 SNX27Q96L92 541 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 MFSD14AQ96MC6 490 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 PDCD2LQ9BRP1 358 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 C16orf70Q9BSU1 422 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 AMNQ9BXJ7 453 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 KCNH6Q9H252 994 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 SETD4Q9NVD3 440 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 PIEZO1Q92508 2521 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 XIRP2A4UGR9 3374 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 ZMYM6O95789 1325 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 ADGRA3Q8IWK6 1321 aa8.02□□□□□ -1.13
NPIPB3-203ENST00000504841 MYO7AQ13402 2215 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 H3BRB1 525 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 STXBP3O00186 592 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 ZNF213O14771 459 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 OPLAHO14841 1288 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 LINC01565O15544 149 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 GHRP10912 638 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 PCP11498 1178 aaKnown RBP8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 CCND2P30279 289 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 TIE1P35590 1138 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 LTBRP36941 435 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 NDUFV1P49821 464 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 SP2Q02086 613 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 SMAD4Q13485 552 aaKnown RBP8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 PGM5Q15124 567 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 DGKHQ86XP1 1220 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 HOMER1Q86YM7 354 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 PRSS33Q8NF86 280 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 RILPL2Q969X0 211 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 C11orf84Q9BUA3 381 aaPredicted RBP8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 RNPEPQ9H4A4 650 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 TUT1Q9H6E5 874 aaKnown RBP8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 BCAS3Q9H6U6 928 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 JMJD4Q9H9V9 463 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 ALG13Q9NP73 1137 aaKnown RBP8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 CD207Q9UJ71 328 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 SUPT16HQ9Y5B9 1047 aaKnown RBP8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 ATG2AQ2TAZ0 1938 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 SALL3Q9BXA9 1300 aa8.01□□□□□ -1.13
NPIPB3-203ENST00000504841 RALGAPA2Q2PPJ7 1873 aa8□□□□□ -1.13
NPIPB3-203ENST00000504841 COL4A6Q14031 1691 aa8□□□□□ -1.13
NPIPB3-203ENST00000504841 TMEM221A6NGB7 291 aa8□□□□□ -1.13
NPIPB3-203ENST00000504841 M0R296 226 aa8□□□□□ -1.13
NPIPB3-203ENST00000504841 NCK2O43639 380 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms