RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 KIF28PB7ZC32 967 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 H3BRB1 525 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 HOXD8P13378 290 aaPredicted RBP25.31■■□□□ 1.64
LSM6-203ENST00000503982 SEMA3FQ13275 785 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 ADCK5Q3MIX3 580 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 RASEFQ8IZ41 740 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 ATP6V0A1Q93050 837 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 CTAGE1Q96RT6 745 aa25.31■■□□□ 1.64
LSM6-203ENST00000503982 TUT1Q9H6E5 874 aaKnown RBP25.31■■□□□ 1.64
LSM6-203ENST00000503982 PARNO95453 639 aaKnown RBP25.3■■□□□ 1.64
LSM6-203ENST00000503982 NAPAP54920 295 aa25.3■■□□□ 1.64
LSM6-203ENST00000503982 C16orf70Q9BSU1 422 aa25.3■■□□□ 1.64
LSM6-203ENST00000503982 USP26Q9BXU7 913 aa25.3■■□□□ 1.64
LSM6-203ENST00000503982 PKD2L1Q9P0L9 805 aa25.3■■□□□ 1.64
LSM6-203ENST00000503982 ZNF215Q9UL58 517 aaPredicted RBP25.3■■□□□ 1.64
LSM6-203ENST00000503982 BAIAP3O94812 1187 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 HMGB1P09429 215 aaKnown RBP25.29■■□□□ 1.64
LSM6-203ENST00000503982 SMIM10L2AP0DMW4 78 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 SMIM10L2BP0DMW5 78 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 THPOP40225 353 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 EXOSC10Q01780 885 aaKnown RBP25.29■■□□□ 1.64
LSM6-203ENST00000503982 CNKSR3Q6P9H4 555 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 GIMAP8Q8ND71 665 aaPredicted RBP25.29■■□□□ 1.64
LSM6-203ENST00000503982 CDHR1Q96JP9 859 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 GPR20Q99678 358 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 BRPF3Q9ULD4 1205 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 PCDHA6Q9UN73 950 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 PCDHA8Q9Y5H6 950 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 CNTNAP5Q8WYK1 1306 aa25.29■■□□□ 1.64
LSM6-203ENST00000503982 CDH23Q9H251 3354 aa25.28■■□□□ 1.64
LSM6-203ENST00000503982 CA3P07451 260 aa25.28■■□□□ 1.64
LSM6-203ENST00000503982 CCDC85BQ15834 202 aaPredicted RBP25.28■■□□□ 1.64
LSM6-203ENST00000503982 ZNF618Q5T7W0 954 aa25.28■■□□□ 1.64
LSM6-203ENST00000503982 PHOSPHO2Q8TCD6 241 aa25.28■■□□□ 1.64
LSM6-203ENST00000503982 ZBED2Q9BTP6 218 aa25.28■■□□□ 1.64
LSM6-203ENST00000503982 TSGA10IPQ3SY00 556 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 WWC2Q6AWC2 1192 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 TRIM50Q86XT4 487 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 MICALL1Q8N3F8 863 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 WNT8BQ93098 351 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 GPRASP2Q96D09 838 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 JAKMIP1Q96N16 626 aaKnown RBP25.27■■□□□ 1.64
LSM6-203ENST00000503982 CERS4Q9HA82 394 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 PTPRSQ13332 1948 aa25.27■■□□□ 1.64
LSM6-203ENST00000503982 NBNO60934 754 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 GNAT1P11488 350 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 CPA1P15085 419 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 ADCY7P51828 1080 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 RBL2Q08999 1139 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 MTMR1Q13613 665 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 HIC1Q14526 733 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 HERC6Q8IVU3 1022 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 SENP7Q9BQF6 1050 aa25.26■■□□□ 1.63
LSM6-203ENST00000503982 V9GY48 417 aaPredicted RBP25.26■■□□□ 1.63
LSM6-203ENST00000503982 TREHO43280 583 aa25.25■■□□□ 1.63
LSM6-203ENST00000503982 TLL1O43897 1013 aa25.25■■□□□ 1.63
LSM6-203ENST00000503982 METAP2P50579 478 aaKnown RBP eCLIP25.25■■□□□ 1.63
LSM6-203ENST00000503982 WDR5P61964 334 aaKnown RBP25.25■■□□□ 1.63
LSM6-203ENST00000503982 TRIM71Q2Q1W2 868 aaKnown RBP25.25■■□□□ 1.63
LSM6-203ENST00000503982 BLOC1S2Q6QNY1 142 aa25.25■■□□□ 1.63
LSM6-203ENST00000503982 USP38Q8NB14 1042 aa25.25■■□□□ 1.63
LSM6-203ENST00000503982 RNPEPQ9H4A4 650 aa25.25■■□□□ 1.63
LSM6-203ENST00000503982 RSPH10B2B2RC85 870 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 RSPH10BP0C881 870 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 TCF7P36402 384 aaPredicted RBP25.24■■□□□ 1.63
LSM6-203ENST00000503982 ARHGAP4P98171 946 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 APOBRQ0VD83 1088 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 IKBKEQ14164 716 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 Q6ZUG5 572 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 SERINC5Q86VE9 423 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 PGBD1Q96JS3 809 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 SETD4Q9NVD3 440 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 UNC80Q8N2C7 3258 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 EYSQ5T1H1 3165 aa25.24■■□□□ 1.63
LSM6-203ENST00000503982 ATP9AO75110 1047 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 CXCL10P02778 98 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 CTSHP09668 335 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 ITGB5P18084 799 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 ADGRE1Q14246 886 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 GPNMBQ14956 572 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 PPP1R18Q6NYC8 613 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 COL25A1Q9BXS0 654 aaPredicted RBP25.23■■□□□ 1.63
LSM6-203ENST00000503982 TELO2Q9Y4R8 837 aa25.23■■□□□ 1.63
LSM6-203ENST00000503982 EMSYQ7Z589 1322 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 ABHD14A-ACY1A0A1B0GW23 586 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 SMCO2A6NFE2 343 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 hCG_1984214I3L0E3 225 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 LGR5O75473 907 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 KCNA2P16389 499 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 FAM117BQ6P1L5 589 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 TMCO2Q7Z6W1 182 aaPredicted RBP25.22■■□□□ 1.63
LSM6-203ENST00000503982 ZNF713Q8N859 430 aaPredicted RBP25.22■■□□□ 1.63
LSM6-203ENST00000503982 ARNTL2Q8WYA1 636 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 SEPT1Q8WYJ6 367 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 GLG1Q92896 1179 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 BRF1Q92994 677 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 RIC8AQ9NPQ8 531 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 JADE2Q9NQC1 790 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 SNX14Q9Y5W7 946 aa25.22■■□□□ 1.63
LSM6-203ENST00000503982 UBIAD1Q9Y5Z9 338 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms