RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 EYA4O95677 639 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 MMP1P03956 469 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 SIGLEC14Q08ET2 396 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 CDC37Q16543 378 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 CELF3Q5SZQ8 465 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 MSLNLQ96KJ4 702 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 C16orf70Q9BSU1 422 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 UBA5Q9GZZ9 404 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 TTC41PQ6P2S7 1318 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 PLXNA3P51805 1871 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 H3BRB1 525 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 SORBS3O60504 671 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 CSPG5O95196 566 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 GGPS1O95749 300 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 GOLGA8HP0CJ92 632 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 CLP1Q92989 425 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 OSBPL7Q9BZF2 842 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 TUT1Q9H6E5 874 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 PXMP2Q9NR77 195 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 MRPL11Q9Y3B7 192 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 KAT6AQ92794 2004 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 CFAP54Q96N23 3096 aa18.48■□□□□ 0.55
PDLIM7-210ENST00000503827 LINC00271P0C7V0 271 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 HOXC8P31273 242 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 VPS53Q5VIR6 699 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 PLVAPQ9BX97 442 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 CPVLQ9H3G5 476 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 RNPEPQ9H4A4 650 aa18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 ALG13Q9NP73 1137 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-210ENST00000503827 GNAT1P11488 350 aa18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 AVPR2P30518 371 aa18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 VCPP55072 806 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 BTG3Q14201 252 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 CBX2Q14781 532 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 ALX1Q15699 326 aa18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 SMRP1Q8NCR6 262 aa18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 DCTPP1Q9H773 170 aa18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 MLXIPQ9HAP2 919 aa18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 KIAA1671Q9BY89 1806 aa18.46■□□□□ 0.55
PDLIM7-210ENST00000503827 CFBP00751 764 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 MYCLP12524 364 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 COASYQ13057 564 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 ADGRF4Q8IZF3 695 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 EFHBQ8N7U6 833 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 PI4K2BQ8TCG2 481 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 P2RX5Q93086 422 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 CLEC1BQ9P126 229 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 PLAGL2Q9UPG8 496 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 ZFHX2Q9C0A1 2572 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 CCDC171Q6TFL3 1326 aa18.45■□□□□ 0.54
PDLIM7-210ENST00000503827 TTC3P53804 2025 aa18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 RGS20O76081 388 aa18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 TGFB3P10600 412 aa18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 FAM26DQ5JW98 314 aa18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 MIER1Q8N108 512 aa18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 PDCD2LQ9BRP1 358 aa18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 PHF7Q9BWX1 381 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 RC3H2Q9HBD1 1191 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-210ENST00000503827 H0Y858 1186 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 FGAP02671 866 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 LGALS2P05162 132 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 UBA1P22314 1058 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 NUBP1P53384 320 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 SP2Q02086 613 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 CAMK1Q14012 370 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 QRICH1Q2TAL8 776 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 NAALADL2Q58DX5 795 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 ZNF689Q96CS4 500 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 ASIC4Q96FT7 647 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 RPGRIP1Q96KN7 1286 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 TLR9Q9NR96 1032 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 SETD4Q9NVD3 440 aa18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 USP15Q9Y4E8 981 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-210ENST00000503827 DOCK5Q9H7D0 1870 aa18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 PROB1E7EW31 1015 aa18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 PCP11498 1178 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 HSD17B4P51659 736 aa18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 MFSD6Q6ZSS7 791 aa18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 ADGRD2Q7Z7M1 963 aa18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 USP26Q9BXU7 913 aa18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 SPTBN4Q9H254 2564 aa18.42■□□□□ 0.54
PDLIM7-210ENST00000503827 ENPP3O14638 875 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 ICAM3P32942 547 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 NRIP1P48552 1158 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 ERMP1Q7Z2K6 904 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 VSIG10LQ86VR7 867 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 DGKHQ86XP1 1220 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 PNMA1Q8ND90 353 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 SPPL3Q8TCT6 385 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 VAT1LQ9HCJ6 419 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 HELLSQ9NRZ9 838 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 MAP3K20Q9NYL2 800 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms