RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 CFBP00751 764 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 MYCLP12524 364 aaPredicted RBP18.37■□□□□ 0.53
DDR1-250ENST00000503628 CLUL1Q15846 466 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 MCMDC2Q4G0Z9 681 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 DGKHQ86XP1 1220 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 SNX27Q96L92 541 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 PHOX2BQ99453 314 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 C16orf70Q9BSU1 422 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 IFIH1Q9BYX4 1025 aaKnown RBP18.37■□□□□ 0.53
DDR1-250ENST00000503628 VAT1LQ9HCJ6 419 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 MUTYHQ9UIF7 546 aa18.37■□□□□ 0.53
DDR1-250ENST00000503628 TREHO43280 583 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 NCK2O43639 380 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 GGPS1O95749 300 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 SDSP20132 328 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 SP2Q02086 613 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 DLX2Q07687 328 aaPredicted RBP18.36■□□□□ 0.53
DDR1-250ENST00000503628 SMAD2Q15796 467 aaKnown RBP18.36■□□□□ 0.53
DDR1-250ENST00000503628 CTC1Q2NKJ3 1217 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 PNMA1Q8ND90 353 aa18.36■□□□□ 0.53
DDR1-250ENST00000503628 TECTAO75443 2155 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 ZMYM6O95789 1325 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 MBTPS2O43462 519 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 CTSHP09668 335 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
DDR1-250ENST00000503628 CTNNB1P35222 781 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 HYAL1Q12794 435 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
DDR1-250ENST00000503628 KCNV1Q6PIU1 500 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
DDR1-250ENST00000503628 RNF135Q8IUD6 432 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 ESR2Q92731 530 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 PDCD2LQ9BRP1 358 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 RNPEPQ9H4A4 650 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 JMJD4Q9H9V9 463 aa18.35■□□□□ 0.53
DDR1-250ENST00000503628 COL4A6Q14031 1691 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 NEDD4P46934 1319 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 H3BRB1 525 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 HIP1O00291 1037 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 OPLAHO14841 1288 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 GRM6O15303 877 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 DHX16O60231 1041 aaKnown RBP18.34■□□□□ 0.53
DDR1-250ENST00000503628 SMIM10L2AP0DMW4 78 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 SMIM10L2BP0DMW5 78 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 HOXC8P31273 242 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 HSD17B4P51659 736 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
DDR1-250ENST00000503628 FIBCD1Q8N539 461 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 IL17RAQ96F46 866 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 ZFP91Q96JP5 570 aaPredicted RBP18.34■□□□□ 0.53
DDR1-250ENST00000503628 POP1Q99575 1024 aaKnown RBP18.34■□□□□ 0.53
DDR1-250ENST00000503628 TUT1Q9H6E5 874 aaKnown RBP18.34■□□□□ 0.53
DDR1-250ENST00000503628 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
DDR1-250ENST00000503628 C5orf67F2Z3F1 127 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 RB1P06400 928 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 UBA1P22314 1058 aaKnown RBP18.33■□□□□ 0.52
DDR1-250ENST00000503628 BMPR1AP36894 532 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 ASPRV1Q53RT3 343 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 VSIG10LQ86VR7 867 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 GPKOWQ92917 476 aaPredicted RBP eCLIP18.33■□□□□ 0.52
DDR1-250ENST00000503628 RNF41Q9H4P4 317 aaPredicted RBP18.33■□□□□ 0.52
DDR1-250ENST00000503628 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 BCAS3Q9H6U6 928 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.52
DDR1-250ENST00000503628 CAND2O75155 1236 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 LINC00271P0C7V0 271 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 TGFB3P10600 412 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 GTF2F1P35269 517 aaKnown RBP eCLIP18.32■□□□□ 0.528e-7■■■■□ 24.7
DDR1-250ENST00000503628 PGM5Q15124 567 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 IER5LQ5T953 404 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 PRSS33Q8NF86 280 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 IL31RAQ8NI17 732 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 EDAQ92838 391 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 LMAN2LQ9H0V9 348 aa18.32■□□□□ 0.52
DDR1-250ENST00000503628 STXBP3O00186 592 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 KDM4AO75164 1064 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 LGALS2P05162 132 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 PARP1P09874 1014 aaKnown RBP18.31■□□□□ 0.52
DDR1-250ENST00000503628 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
DDR1-250ENST00000503628 GHRHRQ02643 423 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 SMAD4Q13485 552 aaKnown RBP18.31■□□□□ 0.52
DDR1-250ENST00000503628 IQCA1Q86XH1 822 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 APBB2Q92870 758 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 C11orf84Q9BUA3 381 aaPredicted RBP18.31■□□□□ 0.52
DDR1-250ENST00000503628 AMNQ9BXJ7 453 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 SETD4Q9NVD3 440 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 USP34Q70CQ2 3546 aa18.31■□□□□ 0.52
DDR1-250ENST00000503628 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
DDR1-250ENST00000503628 LINC01565O15544 149 aa18.3■□□□□ 0.52
DDR1-250ENST00000503628 TBX10O75333 385 aa18.3■□□□□ 0.52
DDR1-250ENST00000503628 CSPG5O95196 566 aa18.3■□□□□ 0.52
DDR1-250ENST00000503628 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
DDR1-250ENST00000503628 BMP2KLQ5H9B9 411 aa18.3■□□□□ 0.52
DDR1-250ENST00000503628 CWC27Q6UX04 472 aaKnown RBP18.3■□□□□ 0.52
DDR1-250ENST00000503628 BMP8AQ7Z5Y6 402 aa18.3■□□□□ 0.52
DDR1-250ENST00000503628 MAP3K20Q9NYL2 800 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms