RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 CRY1Q16526 586 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 ETV3LQ6ZN32 361 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 ARHGAP36Q6ZRI8 547 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 MIB1Q86YT6 1006 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 ARRDC4Q8NCT1 418 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 SIGLEC10Q96LC7 697 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 CELF4Q9BZC1 486 aaKnown RBP8.39□□□□□ -1.07
NIPBL-203ENST00000503274 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-203ENST00000503274 ASH2LQ9UBL3 628 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 CBLCQ9ULV8 474 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 SMG5Q9UPR3 1016 aaKnown RBP8.39□□□□□ -1.07
NIPBL-203ENST00000503274 COQ6Q9Y2Z9 468 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 IRAK3Q9Y616 596 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 B4E1Z4 1266 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 NPTXRO95502 500 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 ATF2P15336 505 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 PDE6AP16499 860 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 IGFBP6P24592 240 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-203ENST00000503274 CACNB2Q08289 660 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-203ENST00000503274 GPR19Q15760 415 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 ZNF124Q15973 351 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 ABHD17CQ6PCB6 329 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 OSTM1Q86WC4 334 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 FAM126BQ8IXS8 530 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 YIPF4Q9BSR8 244 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 INTS7Q9NVH2 962 aaKnown RBP8.38□□□□□ -1.07
NIPBL-203ENST00000503274 PLAAQ9Y263 795 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 FAN1Q9Y2M0 1017 aa8.38□□□□□ -1.07
NIPBL-203ENST00000503274 TNPO3Q9Y5L0 923 aaKnown RBP8.38□□□□□ -1.07
NIPBL-203ENST00000503274 TCRBV5S4A2TA0A5A2 114 aa8.37□□□□□ -1.07
NIPBL-203ENST00000503274 IRS4O14654 1257 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-203ENST00000503274 MC3RP41968 323 aa8.37□□□□□ -1.07
NIPBL-203ENST00000503274 JAG1P78504 1218 aa8.37□□□□□ -1.07
NIPBL-203ENST00000503274 LACTBP83111 547 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-203ENST00000503274 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
NIPBL-203ENST00000503274 RBM12BQ8IXT5 1001 aaKnown RBP8.37□□□□□ -1.07
NIPBL-203ENST00000503274 IGSF22Q8N9C0 903 aa8.37□□□□□ -1.07
NIPBL-203ENST00000503274 CD320Q9NPF0 282 aa8.37□□□□□ -1.07
NIPBL-203ENST00000503274 AMY2AP04746 511 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 KRT15P19012 456 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 AMY2BP19961 511 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 JAM2P57087 298 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 TUSC3Q13454 348 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 ZNF460Q14592 562 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 ZCCHC8Q6NZY4 707 aaKnown RBP8.36□□□□□ -1.07
NIPBL-203ENST00000503274 B3GNT8Q7Z7M8 397 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 DDX53Q86TM3 631 aaKnown RBP8.36□□□□□ -1.07
NIPBL-203ENST00000503274 DHX37Q8IY37 1157 aaKnown RBP8.36□□□□□ -1.07
NIPBL-203ENST00000503274 NIM1KQ8IY84 436 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 NLGN4XQ8N0W4 816 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 CISD2Q8N5K1 135 aaKnown RBP8.36□□□□□ -1.07
NIPBL-203ENST00000503274 SH3RF2Q8TEC5 729 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 NGRNQ9NPE2 291 aaKnown RBP8.36□□□□□ -1.07
NIPBL-203ENST00000503274 DTLQ9NZJ0 730 aa8.36□□□□□ -1.07
NIPBL-203ENST00000503274 CNOT6Q9ULM6 557 aaKnown RBP8.36□□□□□ -1.07
NIPBL-203ENST00000503274 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 SMARCA5O60264 1052 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-203ENST00000503274 CLSTN1O94985 981 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 LTFP02788 710 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 FLT3P36888 993 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 FOXO4P98177 505 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 KCNA10Q16322 511 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 TAF7LQ5H9L4 462 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 CD300LDQ6UXZ3 194 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 EP400NLQ6ZTU2 488 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 KCTD1Q719H9 257 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-203ENST00000503274 ZC3H18Q86VM9 953 aaKnown RBP8.35□□□□□ -1.07
NIPBL-203ENST00000503274 ANKLE2Q86XL3 938 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 PTRH1Q86Y79 214 aaKnown RBP8.35□□□□□ -1.07
NIPBL-203ENST00000503274 TMEFF1Q8IYR6 380 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 TTLL11Q8NHH1 800 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 DDX11Q96FC9 970 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 TOE1Q96GM8 510 aaKnown RBP8.35□□□□□ -1.07
NIPBL-203ENST00000503274 KRTAP4-7Q9BYR0 210 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 CD244Q9BZW8 370 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-203ENST00000503274 SAMD15Q9P1V8 674 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 SRPK3Q9UPE1 567 aa8.35□□□□□ -1.07
NIPBL-203ENST00000503274 SCRIBQ14160 1630 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 NPIPB6E9PJ23 425 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 C8BP07358 591 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 STAT5AP42229 794 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 EPHA5P54756 1037 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 GYS2P54840 703 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 GRIN1Q05586 938 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 SSPNQ14714 243 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 TMEM177Q53S58 311 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 UBE2R2Q712K3 238 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-203ENST00000503274 OVCH1Q7RTY7 1134 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 FAM26EQ8N5C1 309 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 SMARCC2Q8TAQ2 1214 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 MFSD3Q96ES6 412 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 SMURF1Q9HCE7 757 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 TELO2Q9Y4R8 837 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 KCTD3Q9Y597 815 aa8.34□□□□□ -1.07
NIPBL-203ENST00000503274 MAN2B1O00754 1011 aa8.33□□□□□ -1.08
NIPBL-203ENST00000503274 JMJD7P0C870 316 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms