RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 SCN10AQ9Y5Y9 1956 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 SREBF1P36956 1147 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 NKX3-2P78367 333 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 MTMR1Q13613 665 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 LAMC2Q13753 1193 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 TRIM60Q495X7 471 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 ZNF396Q96N95 335 aaPredicted RBP18.34■□□□□ 0.53
LMNA-217ENST00000498722 CFAP45Q9UL16 551 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 WDR81Q562E7 1941 aa18.34■□□□□ 0.53
LMNA-217ENST00000498722 MYH9P35579 1960 aaKnown RBP18.33■□□□□ 0.53
LMNA-217ENST00000498722 SPATA31C2B4DYI2 1134 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 PQBP1O60828 265 aaKnown RBP18.33■□□□□ 0.53
LMNA-217ENST00000498722 CABYRO75952 493 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 SP2Q02086 613 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 SP4Q02446 784 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 CELF3Q5SZQ8 465 aaKnown RBP18.33■□□□□ 0.53
LMNA-217ENST00000498722 BRAPQ7Z569 592 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 BLIDQ8IZY5 108 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 GPRASP2Q96D09 838 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 CDHR1Q96JP9 859 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 SPATA33Q96N06 139 aa18.33■□□□□ 0.53
LMNA-217ENST00000498722 TRIP12Q14669 1992 aaPredicted RBP18.33■□□□□ 0.52
LMNA-217ENST00000498722 ELP1O95163 1332 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 A0A0U1RQG5 324 aaPredicted RBP18.32■□□□□ 0.52
LMNA-217ENST00000498722 A6NJR5 290 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 NOP56O00567 594 aaKnown RBP18.32■□□□□ 0.52
LMNA-217ENST00000498722 MMP3P08254 477 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 ITGB5P18084 799 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 ICAM3P32942 547 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 PSMC6P62333 389 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 NEDD9Q14511 834 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 GSE1Q14687 1217 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 DGKDQ16760 1214 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 MYSM1Q5VVJ2 828 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 CYFIP1Q7L576 1253 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
LMNA-217ENST00000498722 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 PRDM5Q9NQX1 630 aaPredicted RBP18.32■□□□□ 0.52
LMNA-217ENST00000498722 GJB4Q9NTQ9 266 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 ZMYND8Q9ULU4 1186 aaPredicted RBP18.32■□□□□ 0.52
LMNA-217ENST00000498722 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
LMNA-217ENST00000498722 H0YGN5 161 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 KPNA6O60684 536 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 SLC34A2O95436 690 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 SYN1P17600 705 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 UBE2HP62256 183 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 PURAQ00577 322 aaKnown RBP18.31■□□□□ 0.52
LMNA-217ENST00000498722 GUCY1B3Q02153 619 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 SEMA3FQ13275 785 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 CEP55Q53EZ4 464 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 KRT40Q6A162 431 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 PPTC7Q8NI37 304 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
LMNA-217ENST00000498722 MXRA8Q9BRK3 442 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 MTG1Q9BT17 334 aaPredicted RBP18.31■□□□□ 0.52
LMNA-217ENST00000498722 PHF20Q9BVI0 1012 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 JADE2Q9NQC1 790 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 PRKAG2Q9UGJ0 569 aa18.31■□□□□ 0.52
LMNA-217ENST00000498722 TLE2Q04725 743 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 ITGA7Q13683 1181 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 SNX17Q15036 470 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
LMNA-217ENST00000498722 DAGLBQ8NCG7 672 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 GIMAP8Q8ND71 665 aaPredicted RBP18.3■□□□□ 0.52
LMNA-217ENST00000498722 CYP2W1Q8TAV3 490 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 GDPD2Q9HCC8 539 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 BRMS1Q9HCU9 246 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 MROH7Q68CQ1 1323 aa18.3■□□□□ 0.52
LMNA-217ENST00000498722 CCDC194A0A1B0GVG4 234 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 DCDC2CA8MYV0 355 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 ARVCFO00192 962 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 ZNF286BP0CG31 522 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
LMNA-217ENST00000498722 HSDL1Q3SXM5 330 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 PRPF38BQ5VTL8 546 aaKnown RBP18.29■□□□□ 0.52
LMNA-217ENST00000498722 C1orf53Q5VUE5 145 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 METTL7BQ6UX53 244 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 PLA2G4DQ86XP0 818 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
LMNA-217ENST00000498722 SPATA32Q96LK8 384 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 KCNH7Q9NS40 1196 aa18.29■□□□□ 0.52
LMNA-217ENST00000498722 MAFGO15525 162 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 ATP9AO75110 1047 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 KRT2P35908 639 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 NONOQ15233 471 aaKnown RBP eCLIP18.28■□□□□ 0.52
LMNA-217ENST00000498722 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 TBCKQ8TEA7 893 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 UIMC1Q96RL1 719 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 SENP7Q9BQF6 1050 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 SDF4Q9BRK5 362 aa18.28■□□□□ 0.52
LMNA-217ENST00000498722 FAM86B1E9PN63 330 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 TLR3O15455 904 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms