RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 GBP4Q96PP9 640 aa19.83■□□□□ 0.77
CTDSP1-215ENST00000498160 MLXIPQ9HAP2 919 aa19.83■□□□□ 0.77
CTDSP1-215ENST00000498160 JPH1Q9HDC5 661 aaPredicted RBP19.83■□□□□ 0.77
CTDSP1-215ENST00000498160 PSMD10O75832 226 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 FXR2P51116 673 aaKnown RBP eCLIP19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 PDIA5Q14554 519 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 NBR1Q14596 966 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 PTPAQ15257 358 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 CELF3Q5SZQ8 465 aaKnown RBP19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 ZNF746Q6NUN9 644 aaPredicted RBP19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 C4orf32Q8N8J7 132 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 TNPO1Q92973 898 aaKnown RBP19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 SPATA32Q96LK8 384 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 AK8Q96MA6 479 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 AP5M1Q9H0R1 490 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 PDGFCQ9NRA1 345 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 SLC9A2Q9UBY0 812 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 DDX20Q9UHI6 824 aaKnown RBP19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 CLIC4Q9Y696 253 aa19.82■□□□□ 0.76
CTDSP1-215ENST00000498160 WNT7AO00755 349 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 SPTLC2O15270 562 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 SLC26A4O43511 780 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 GGPS1O95749 300 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 JAK3P52333 1124 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 PPP2R5CQ13362 524 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 PRAMEF19Q5SWL8 479 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 CLEC17AQ6ZS10 378 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 ERMNQ8TAM6 284 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 HAS1Q92839 578 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 ZFP91Q96JP5 570 aaPredicted RBP19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 TTC12Q9H892 705 aaPredicted RBP19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 RCOR1Q9UKL0 485 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 GNEQ9Y223 722 aaKnown RBP19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 PCNTO95613 3336 aa19.81■□□□□ 0.76
CTDSP1-215ENST00000498160 ELP1O95163 1332 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 WDR64B1ANS9 1081 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 NOP56O00567 594 aaKnown RBP19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 ZEB2O60315 1214 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 FARP2O94887 1054 aaPredicted RBP19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 SMPD1P17405 629 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 LONP1P36776 959 aaKnown RBP19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 TXKP42681 527 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 CPT1AP50416 773 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 NKX3-2P78367 333 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 LY6KQ17RY6 165 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 TLK2Q86UE8 772 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 KRI1Q8N9T8 703 aaKnown RBP19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 TRPV1Q8NER1 839 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 OR6J1Q8NGC5 347 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 NEK9Q8TD19 979 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 SH3TC2Q8TF17 1288 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.8■□□□□ 0.769e-7■□□□□ 11.3
CTDSP1-215ENST00000498160 TMEM60Q9H2L4 133 aa19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 TFIP11Q9UBB9 837 aaKnown RBP19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 SRPRBQ9Y5M8 271 aaKnown RBP19.8■□□□□ 0.76
CTDSP1-215ENST00000498160 DHX15O43143 795 aaKnown RBP19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 KPNA6O60684 536 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 DKC1O60832 514 aaKnown RBP eCLIP19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 ATP9AO75110 1047 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 ARIH2O95376 493 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 CEBPZQ03701 1054 aaKnown RBP19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 TRIM32Q13049 653 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 ITGB3BPQ13352 177 aaPredicted RBP19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 FOXD4L6Q3SYB3 417 aaPredicted RBP19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 HAUS3Q68CZ6 603 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 FOXD4L3Q6VB84 417 aaPredicted RBP19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 CYFIP1Q7L576 1253 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 KCTD17Q8N5Z5 321 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 PPTC7Q8NI37 304 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 ZNF333Q96JL9 665 aa19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 UPF3AQ9H1J1 476 aaKnown RBP19.79■□□□□ 0.76
CTDSP1-215ENST00000498160 GOLGA6L22H0YM25 854 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 CUTAO60888 179 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 MUTP22033 750 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 CCND3P30281 292 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 GJA9P57773 515 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 ARHGAP1Q07960 439 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 MIS18BP1Q6P0N0 1132 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 ZNF579Q8NAF0 562 aaKnown RBP19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 LEO1Q8WVC0 666 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 SEPT1Q8WYJ6 367 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 SPATA33Q96N06 139 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 PAK6Q9NQU5 681 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 PKD2L1Q9P0L9 805 aa19.78■□□□□ 0.76
CTDSP1-215ENST00000498160 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 PSAPP07602 524 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 TXLNAP40222 546 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 ME1P48163 572 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 SP2Q02086 613 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 B3GNT9Q6UX72 402 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 MIER3Q7Z3K6 550 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 RNF180Q86T96 592 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 IGSF22Q8N9C0 903 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 ARRDC4Q8NCT1 418 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 FTOQ9C0B1 505 aaKnown RBP eCLIP19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 XPNPEP3Q9NQH7 507 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 LRWD1Q9UFC0 647 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 VAV3Q9UKW4 847 aa19.77■□□□□ 0.76
CTDSP1-215ENST00000498160 PCDHA10Q9Y5I2 948 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms