RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PRPF3O43395 683 aaKnown RBP17.53■□□□□ 0.4
NUP50-219ENST00000497960 PFKMP08237 780 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 ITGB5P18084 799 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
NUP50-219ENST00000497960 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 MTMR1Q13613 665 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 HERVK_113Q902F9 699 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 TBC1D32Q96NH3 1257 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 GPR20Q99678 358 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 C16orf70Q9BSU1 422 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 BCAS3Q9H6U6 928 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 JADE2Q9NQC1 790 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 PDRG1Q9NUG6 133 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 MTMR10Q9NXD2 777 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 UBIAD1Q9Y5Z9 338 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 H3BRB1 525 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 MAFGO15525 162 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 LGALS2P05162 132 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 RFC2P35250 354 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 CCT2P78371 535 aaKnown RBP17.52■□□□□ 0.4
NUP50-219ENST00000497960 SP4Q02446 784 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 RASIP1Q5U651 963 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 OTOP2Q7RTS6 562 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 TUT1Q9H6E5 874 aaKnown RBP17.52■□□□□ 0.4
NUP50-219ENST00000497960 C6orf50Q9HD87 102 aa17.52■□□□□ 0.4
NUP50-219ENST00000497960 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 IQCF3P0C7M6 154 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 IFNAR1P17181 557 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
NUP50-219ENST00000497960 DEFB128Q7Z7B8 93 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 AFAP1L1Q8TED9 768 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 PHKBQ93100 1093 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 PGBD1Q96JS3 809 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 SLC26A6Q9BXS9 759 aa17.51■□□□□ 0.39
NUP50-219ENST00000497960 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
NUP50-219ENST00000497960 ZNF215Q9UL58 517 aaPredicted RBP17.51■□□□□ 0.39
NUP50-219ENST00000497960 CPLX1O14810 134 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 ATP9AO75110 1047 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 ACTN1P12814 892 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 KCNA2P16389 499 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 GNA11P29992 359 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 PTK7Q13308 1070 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 NTRK3Q16288 839 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 PKN1Q16512 942 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 UTP14CQ5TAP6 766 aaKnown RBP17.5■□□□□ 0.39
NUP50-219ENST00000497960 MCTP2Q6DN12 878 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 TRIM22Q8IYM9 498 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 ZNF274Q96GC6 653 aaPredicted RBP17.5■□□□□ 0.39
NUP50-219ENST00000497960 FAM161BQ96MY7 647 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 CTAGE1Q96RT6 745 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 MXRA8Q9BRK3 442 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 FTOQ9C0B1 505 aaKnown RBP eCLIP17.5■□□□□ 0.39
NUP50-219ENST00000497960 ZMYND12Q9H0C1 365 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
NUP50-219ENST00000497960 TMEM260Q9NX78 707 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 PKD2L1Q9P0L9 805 aa17.5■□□□□ 0.39
NUP50-219ENST00000497960 TMEM265A0A087WTH1 108 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 C17orf102A2RUQ5 167 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 ZBBXA8MT70 800 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 PARNO95453 639 aaKnown RBP17.49■□□□□ 0.39
NUP50-219ENST00000497960 SMIM10L2AP0DMW4 78 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 SMIM10L2BP0DMW5 78 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 SELPP16109 830 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 ZNF76P36508 570 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 SREBF1P36956 1147 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
NUP50-219ENST00000497960 CEP55Q53EZ4 464 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 JAKMIP3Q5VZ66 844 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
NUP50-219ENST00000497960 CCDC148Q8NFR7 591 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
NUP50-219ENST00000497960 SEMA6BQ9H3T3 888 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 KCNH7Q9NS40 1196 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 CXXC1Q9P0U4 656 aaPredicted RBP17.49■□□□□ 0.39
NUP50-219ENST00000497960 SLC4A7Q9Y6M7 1214 aa17.49■□□□□ 0.39
NUP50-219ENST00000497960 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 GNAT1P11488 350 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 DNAJB2P25686 324 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 TCF7P36402 384 aaPredicted RBP17.48■□□□□ 0.39
NUP50-219ENST00000497960 NEK4P51957 841 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 ARHGAP4P98171 946 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 ZNF200P98182 395 aaPredicted RBP17.48■□□□□ 0.39
NUP50-219ENST00000497960 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
NUP50-219ENST00000497960 RBL2Q08999 1139 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 RABEP1Q15276 862 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 LRRC8DQ7L1W4 858 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 TRIM50Q86XT4 487 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 REXO1Q8N1G1 1221 aaKnown RBP17.48■□□□□ 0.39
NUP50-219ENST00000497960 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 ATP6V0A1Q93050 837 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 SDF4Q9BRK5 362 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 LARP6Q9BRS8 491 aaKnown RBP17.48■□□□□ 0.39
NUP50-219ENST00000497960 JPH1Q9HDC5 661 aaPredicted RBP17.48■□□□□ 0.39
NUP50-219ENST00000497960 STXBP5LQ9Y2K9 1186 aa17.48■□□□□ 0.39
NUP50-219ENST00000497960 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
NUP50-219ENST00000497960 GRXCR1A8MXD5 290 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms