RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 RXRAP19793 462 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 TAP1Q03518 808 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 SEMA3FQ13275 785 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 NECTIN1Q15223 517 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 PCNX4Q63HM2 1172 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 TRAF7Q6Q0C0 670 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 CMTR1Q8N1G2 835 aaKnown RBP19.75■□□□□ 0.75
SMC4-226ENST00000497311 MICALL1Q8N3F8 863 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 ATP6V0A1Q93050 837 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 ZBED2Q9BTP6 218 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 TSPYL2Q9H2G4 693 aaPredicted RBP19.75■□□□□ 0.75
SMC4-226ENST00000497311 SLC12A7Q9Y666 1083 aa19.75■□□□□ 0.75
SMC4-226ENST00000497311 RFXAPO00287 272 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 GTPBP6O43824 516 aaPredicted RBP19.74■□□□□ 0.75
SMC4-226ENST00000497311 SMIM10L2AP0DMW4 78 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 SMIM10L2BP0DMW5 78 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 COL9A3Q14050 684 aaPredicted RBP19.74■□□□□ 0.75
SMC4-226ENST00000497311 IKBKEQ14164 716 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 NLRX1Q86UT6 975 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 SERINC5Q86VE9 423 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 ARNTL2Q8WYA1 636 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 ASB2Q96Q27 587 aa19.74■□□□□ 0.75
SMC4-226ENST00000497311 ARHGEF15O94989 841 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 POU3F3P20264 500 aaPredicted RBP19.73■□□□□ 0.75
SMC4-226ENST00000497311 THPOP40225 353 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 DEFB103AP81534 67 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 MRPS5P82675 430 aaKnown RBP19.73■□□□□ 0.75
SMC4-226ENST00000497311 TCTN1Q2MV58 587 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 GPR20Q99678 358 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 SENP7Q9BQF6 1050 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 LRRC2Q9BYS8 371 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 RNPEPQ9H4A4 650 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 PSTPIP2Q9H939 334 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 EMSYQ7Z589 1322 aa19.73■□□□□ 0.75
SMC4-226ENST00000497311 PTPRSQ13332 1948 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 EPOPA6NHQ4 379 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 RSPH10B2B2RC85 870 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 LGR5O75473 907 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 RSPH10BP0C881 870 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 HOXC8P31273 242 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 MBTPS1Q14703 1052 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 BMP2KLQ5H9B9 411 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 RNF20Q5VTR2 975 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 TMCO2Q7Z6W1 182 aaPredicted RBP19.72■□□□□ 0.75
SMC4-226ENST00000497311 RAB11FIP4Q86YS3 637 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 CCDC82Q8N4S0 544 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 FANCBQ8NB91 859 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 GIMAP8Q8ND71 665 aaPredicted RBP19.72■□□□□ 0.75
SMC4-226ENST00000497311 ZNF215Q9UL58 517 aaPredicted RBP19.72■□□□□ 0.75
SMC4-226ENST00000497311 MTCH2Q9Y6C9 303 aa19.72■□□□□ 0.75
SMC4-226ENST00000497311 PRRC2BQ5JSZ5 2229 aaKnown RBP19.72■□□□□ 0.75
SMC4-226ENST00000497311 DOCK5Q9H7D0 1870 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 TREHO43280 583 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 GJB5O95377 273 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 GNAT1P11488 350 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 SP4Q02446 784 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 UTP14CQ5TAP6 766 aaKnown RBP19.71■□□□□ 0.75
SMC4-226ENST00000497311 SYNE3Q6ZMZ3 975 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 TMTC3Q6ZXV5 915 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 SGMS1Q86VZ5 419 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 CDHR1Q96JP9 859 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 RAD9AQ99638 391 aa19.71■□□□□ 0.75
SMC4-226ENST00000497311 hCG_1642624A0A1W2PR95 340 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 LCHNA4D1U4 455 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 SKIV2LQ15477 1246 aaKnown RBP19.7■□□□□ 0.74
SMC4-226ENST00000497311 CENPQQ7L2Z9 268 aaPredicted RBP19.7■□□□□ 0.74
SMC4-226ENST00000497311 MICU3Q86XE3 530 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 TRIM50Q86XT4 487 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 IL27Q8NEV9 243 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 DBF4BQ8NFT6 615 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 GPRASP2Q96D09 838 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 SETD4Q9NVD3 440 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 TRANK1O15050 2925 aa19.7■□□□□ 0.74
SMC4-226ENST00000497311 SPDYE3A6NKU9 549 aa19.69■□□□□ 0.74
SMC4-226ENST00000497311 CAND2O75155 1236 aa19.69■□□□□ 0.74
SMC4-226ENST00000497311 NEK1Q96PY6 1258 aa19.69■□□□□ 0.74
SMC4-226ENST00000497311 TELO2Q9Y4R8 837 aa19.69■□□□□ 0.74
SMC4-226ENST00000497311 TNFRSF10AO00220 468 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 GRB10Q13322 594 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 UBE2SQ16763 222 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 FAM117BQ6P1L5 589 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 HEATR3Q7Z4Q2 680 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 SPRED2Q7Z698 418 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 RBM28Q9NW13 759 aaKnown RBP19.68■□□□□ 0.74
SMC4-226ENST00000497311 PCDHA6Q9UN73 950 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 PCDHA8Q9Y5H6 950 aa19.68■□□□□ 0.74
SMC4-226ENST00000497311 ATP9AO75110 1047 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 AMHP03971 560 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 CTSHP09668 335 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 KCNA2P16389 499 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 TCF7P36402 384 aaPredicted RBP19.67■□□□□ 0.74
SMC4-226ENST00000497311 ARHGAP4P98171 946 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 PLEKHG4Q58EX7 1191 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 KRT40Q6A162 431 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 APOA5Q6Q788 366 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMC4-226ENST00000497311 SKAP1Q86WV1 359 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 SEPT8Q92599 483 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 EHMT1Q9H9B1 1298 aa19.67■□□□□ 0.74
SMC4-226ENST00000497311 INSL6Q9Y581 213 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms