RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 SUGCTQ9HAC7 445 aa19.45■□□□□ 0.7
TRAPPC3-207ENST00000497251 XIRP2A4UGR9 3374 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 LCHNA4D1U4 455 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 LINC01553A4QN01 128 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 E7EWF7 191 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 CYTH3O43739 400 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 DDAH1O94760 285 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 LGALS2P05162 132 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 HTRA4P83105 476 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 MKRN4PQ13434 485 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 MBTPS1Q14703 1052 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 TEX2Q8IWB9 1127 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 DBF4BQ8NFT6 615 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 IL31RAQ8NI17 732 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 CTCFLQ8NI51 663 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 APBB2Q92870 758 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 RRP36Q96EU6 259 aaKnown RBP19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 CDHR1Q96JP9 859 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 IL25Q9H293 177 aa19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 ARIH1Q9Y4X5 557 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC3-207ENST00000497251 TCF20Q9UGU0 1960 aaKnown RBP19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 RPLP2P05387 115 aaKnown RBP19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 SMIM10L2AP0DMW4 78 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 SMIM10L2BP0DMW5 78 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 GSPT1P15170 499 aaKnown RBP19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 KCNQ1P51787 676 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 ZNF200P98182 395 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 PTPROQ16827 1216 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 SLC35G1Q2M3R5 365 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 PCNX4Q63HM2 1172 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 RPAINQ86UA6 219 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 NLRX1Q86UT6 975 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 SP7Q8TDD2 431 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 IGDCC4Q8TDY8 1250 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 MAP4K1Q92918 833 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 RNPEPQ9H4A4 650 aa19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 SEC63Q9UGP8 760 aaKnown RBP19.43■□□□□ 0.7
TRAPPC3-207ENST00000497251 SGSM2O43147 1006 aa19.42■□□□□ 0.7
TRAPPC3-207ENST00000497251 MRPS9P82933 396 aaKnown RBP19.42■□□□□ 0.7
TRAPPC3-207ENST00000497251 SMARCC2Q8TAQ2 1214 aa19.42■□□□□ 0.7
TRAPPC3-207ENST00000497251 WNT8BQ93098 351 aa19.42■□□□□ 0.7
TRAPPC3-207ENST00000497251 GPR20Q99678 358 aa19.42■□□□□ 0.7
TRAPPC3-207ENST00000497251 NRCAMQ92823 1304 aa19.42■□□□□ 0.7
TRAPPC3-207ENST00000497251 MAFGO15525 162 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 PTH1RQ03431 593 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 PUS10Q3MIT2 529 aaKnown RBP19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 FAM26DQ5JW98 314 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 KRT40Q6A162 431 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 TAF2Q6P1X5 1199 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 CASC1Q6TDU7 716 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 FAM43BQ6ZT52 329 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 FBXO22Q8NEZ5 403 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 TOP1MTQ969P6 601 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 REV3LO60673 3130 aa19.41■□□□□ 0.7
TRAPPC3-207ENST00000497251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 TREHO43280 583 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 CALM1P0DP23 149 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 CALM2P0DP24 149 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 CALM3P0DP25 149 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 PDE4AP27815 886 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 HIC1Q14526 733 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 CYFIP1Q7L576 1253 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 MB21D2Q8IYB1 491 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 MYOCDQ8IZQ8 938 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 GDPD5Q8WTR4 605 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 GPRASP2Q96D09 838 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 TMEM87BQ96K49 555 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 MICAL3Q7RTP6 2002 aa19.4■□□□□ 0.7
TRAPPC3-207ENST00000497251 PTPRSQ13332 1948 aa19.39■□□□□ 0.7
TRAPPC3-207ENST00000497251 ADAM17P78536 824 aa19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 TCTN1Q2MV58 587 aa19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 LEXMQ3ZCV2 418 aa19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 TMCO2Q7Z6W1 182 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 ZNF654Q8IZM8 581 aa19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 GPKOWQ92917 476 aaPredicted RBP eCLIP19.39■□□□□ 0.693e-6■□□□□ 9.4
TRAPPC3-207ENST00000497251 TNPO1Q92973 898 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 MRPL38Q96DV4 380 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 NECAB3Q96P71 396 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 KAT6AQ92794 2004 aa19.39■□□□□ 0.69
TRAPPC3-207ENST00000497251 NCK2O43639 380 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 MCM5P33992 734 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 LIFRP42702 1097 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 TIGD5Q53EQ6 642 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 RSPH3Q86UC2 560 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 YME1L1Q96TA2 773 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 UBE2ZQ9H832 354 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 LY9Q9HBG7 655 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 RWDD3Q9Y3V2 267 aa19.38■□□□□ 0.69
TRAPPC3-207ENST00000497251 MEIS2O14770 477 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 ANTXR2P58335 489 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 SEMA3FQ13275 785 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 FAM117BQ6P1L5 589 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 SPRED2Q7Z698 418 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 PSTPIP2Q9H939 334 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 SENP2Q9HC62 589 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 SETD4Q9NVD3 440 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 RTEL1Q9NZ71 1219 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 MTUS1Q9ULD2 1270 aa19.37■□□□□ 0.69
TRAPPC3-207ENST00000497251 COL4A6Q14031 1691 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms