RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 NFASCO94856 1347 aa20.61■□□□□ 0.89
RGP1-202ENST00000496906 ZNF865P0CJ78 1059 aaPredicted RBP20.61■□□□□ 0.89
RGP1-202ENST00000496906 UBA1P22314 1058 aaKnown RBP20.61■□□□□ 0.89
RGP1-202ENST00000496906 LONP1P36776 959 aaKnown RBP20.61■□□□□ 0.89
RGP1-202ENST00000496906 TTLL4Q14679 1199 aa20.61■□□□□ 0.89
RGP1-202ENST00000496906 MFSD14CQ5VZR4 134 aa20.61■□□□□ 0.89
RGP1-202ENST00000496906 B3GNT9Q6UX72 402 aa20.61■□□□□ 0.89
RGP1-202ENST00000496906 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
RGP1-202ENST00000496906 TEKT3Q9BXF9 490 aa20.61■□□□□ 0.89
RGP1-202ENST00000496906 DDX41Q9UJV9 622 aaKnown RBP20.61■□□□□ 0.89
RGP1-202ENST00000496906 POTEMA6NI47 508 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 ADCY3O60266 1144 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 GADD45BO75293 160 aaPredicted RBP20.6■□□□□ 0.89
RGP1-202ENST00000496906 ELNP15502 786 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 LBX1P52954 281 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 PPP2R5CQ13362 524 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 PRAMEF19Q5SWL8 479 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 PXYLP1Q8TE99 480 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 RAB34Q9BZG1 259 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 NRBP1Q9UHY1 535 aa20.6■□□□□ 0.89
RGP1-202ENST00000496906 A0A1W2PQ27 194 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 A0A1W2PQ64 194 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 A0A1W2PQD8 194 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 DDX11L8A8MPP1 907 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 ADCYAP1R1P41586 468 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 PDIA5Q14554 519 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 LY6KQ17RY6 165 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 SHC4Q6S5L8 630 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 AK8Q96MA6 479 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 SDF4Q9BRK5 362 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 UNC45AQ9H3U1 944 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 BCAS3Q9H6U6 928 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 DDX39AO00148 427 aaKnown RBP20.59■□□□□ 0.89
RGP1-202ENST00000496906 HMGCRP04035 888 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 TXNP10599 105 aaKnown RBP20.59■□□□□ 0.89
RGP1-202ENST00000496906 CYBAP13498 195 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 UBE2HP62256 183 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 NEDD9Q14511 834 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 CCDC144BQ3MJ40 725 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 SPECC1Q5M775 1068 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 TMEM63BQ5T3F8 832 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 GIMAP8Q8ND71 665 aaPredicted RBP20.59■□□□□ 0.89
RGP1-202ENST00000496906 PTCH2Q9Y6C5 1203 aa20.59■□□□□ 0.89
RGP1-202ENST00000496906 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.58■□□□□ 0.88
RGP1-202ENST00000496906 GOLGA6L4A6NEF3 574 aa20.58■□□□□ 0.88
RGP1-202ENST00000496906 FARP2O94887 1054 aaPredicted RBP20.58■□□□□ 0.88
RGP1-202ENST00000496906 TRIM32Q13049 653 aa20.58■□□□□ 0.88
RGP1-202ENST00000496906 RESP18Q5W5W9 173 aa20.58■□□□□ 0.88
RGP1-202ENST00000496906 SLAIN1Q8ND83 568 aa20.58■□□□□ 0.88
RGP1-202ENST00000496906 TRPV1Q8NER1 839 aa20.58■□□□□ 0.88
RGP1-202ENST00000496906 JPH1Q9HDC5 661 aaPredicted RBP20.58■□□□□ 0.88
RGP1-202ENST00000496906 LRWD1Q9UFC0 647 aa20.58■□□□□ 0.88
RGP1-202ENST00000496906 PP2D1A8MPX8 630 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 GGPS1O95749 300 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 CMA1P23946 247 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 KRT76Q01546 638 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 CACNB2Q08289 660 aaPredicted RBP20.57■□□□□ 0.88
RGP1-202ENST00000496906 TPRNQ4KMQ1 711 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 IQSEC1Q6DN90 963 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 NCAPH2Q6IBW4 605 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 METTL7BQ6UX53 244 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 USP49Q70CQ1 688 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 CYFIP1Q7L576 1253 aa20.57■□□□□ 0.88
RGP1-202ENST00000496906 SYMPKQ92797 1274 aaKnown RBP20.57■□□□□ 0.88
RGP1-202ENST00000496906 EML1O00423 815 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 ADCY6O43306 1168 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 CHMP2AO43633 222 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 CCNE2O96020 404 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 SMPD1P17405 629 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 CDC25AP30304 524 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 NFKBIBQ15653 356 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 DUSP28Q4G0W2 176 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 CELF3Q5SZQ8 465 aaKnown RBP20.56■□□□□ 0.88
RGP1-202ENST00000496906 ZNF746Q6NUN9 644 aaPredicted RBP20.56■□□□□ 0.88
RGP1-202ENST00000496906 COPS5Q92905 334 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 EPSTI1Q96J88 318 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 SLC9A2Q9UBY0 812 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 TCEAL9Q9UHQ7 104 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 PTPN22Q9Y2R2 807 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 HTTP42858 3142 aa20.56■□□□□ 0.88
RGP1-202ENST00000496906 NKRFO15226 690 aaKnown RBP eCLIP20.55■□□□□ 0.88
RGP1-202ENST00000496906 SORBS3O60504 671 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 PRKAR2AP13861 404 aaKnown RBP20.55■□□□□ 0.88
RGP1-202ENST00000496906 MAP3K21Q5TCX8 1036 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 MRPS27Q92552 414 aaKnown RBP20.55■□□□□ 0.88
RGP1-202ENST00000496906 GOLPH3LQ9H4A5 285 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 FAM237AA0A1B0GTK4 181 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 PTGS1P23219 599 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 GRK4P32298 578 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 JAK3P52333 1124 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 TNFAIP2Q03169 654 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 ARHGAP1Q07960 439 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 GJC2Q5T442 439 aaPredicted RBP20.55■□□□□ 0.88
RGP1-202ENST00000496906 MIER3Q7Z3K6 550 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 DHX37Q8IY37 1157 aaKnown RBP20.55■□□□□ 0.88
RGP1-202ENST00000496906 FSIP1Q8NA03 581 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 MMTAG2Q9BU76 263 aaKnown RBP20.55■□□□□ 0.88
RGP1-202ENST00000496906 MLXIPQ9HAP2 919 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 FAM184BQ9ULE4 1060 aa20.55■□□□□ 0.88
RGP1-202ENST00000496906 GNEQ9Y223 722 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms