RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SORCS2Q96PQ0 1159 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 DDX3XO00571 662 aaKnown RBP eCLIP5.8□□□□□ -1.48
CD46-218ENST00000496723 SUV39H1O43463 412 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 LAMTOR5O43504 91 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 MYO1BO43795 1136 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 DIAPH1O60610 1272 aaKnown RBP5.8□□□□□ -1.48
CD46-218ENST00000496723 FSHBP01225 129 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 FGFR1P11362 822 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 PABPC1P11940 636 aaKnown RBP5.8□□□□□ -1.48
CD46-218ENST00000496723 LCP1P13796 627 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 RPL11P62913 178 aaKnown RBP5.8□□□□□ -1.48
CD46-218ENST00000496723 NKX3-2P78367 333 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 YOD1Q5VVQ6 348 aaPredicted RBP5.8□□□□□ -1.48
CD46-218ENST00000496723 USP53Q70EK8 1073 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 LRP10Q7Z4F1 713 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 MILR1Q7Z6M3 343 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 TEX2Q8IWB9 1127 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 RCBTB1Q8NDN9 531 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 OSBP2Q969R2 916 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 TSC22D4Q9Y3Q8 395 aa5.8□□□□□ -1.48
CD46-218ENST00000496723 TIMM13Q9Y5L4 95 aaPredicted RBP5.8□□□□□ -1.48
CD46-218ENST00000496723 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 ADCY3O60266 1144 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 FPR2P25090 351 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 BCL6P41182 706 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 GTF2A2P52657 109 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 TESK1Q15569 626 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 Q8N1Y9 231 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 UBXN4Q92575 508 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 MKL1Q969V6 931 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 CHAMP1Q96JM3 812 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 CDK5RAP1Q96SZ6 601 aaKnown RBP5.79□□□□□ -1.48
CD46-218ENST00000496723 DNAJC7Q99615 494 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 SYT3Q9BQG1 590 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 OSBPL2Q9H1P3 480 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 PCDHA2Q9Y5H9 948 aa5.79□□□□□ -1.48
CD46-218ENST00000496723 B4GALT3O60512 393 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 CYP7B1O75881 506 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 GDF5P43026 501 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 CEP68Q76N32 757 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 LIMS2Q7Z4I7 341 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 ZBTB38Q8NAP3 1195 aaPredicted RBP5.78□□□□□ -1.48
CD46-218ENST00000496723 CDC6Q99741 560 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 YIPF4Q9BSR8 244 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 FBXL7Q9UJT9 491 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 NPFFR2Q9Y5X5 522 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 X6R8D5 127 aa5.78□□□□□ -1.48
CD46-218ENST00000496723 BLACEA4D250 179 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 FAM153BP0C7A2 387 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 C6P13671 934 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 ZNF28P17035 718 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 TACR2P21452 398 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 LSAMPQ13449 338 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 BMS1Q14692 1282 aaKnown RBP5.77□□□□□ -1.49
CD46-218ENST00000496723 CHRNA2Q15822 529 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 CR1LQ2VPA4 569 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 PRAMEF18Q5VWM3 479 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 STK32CQ86UX6 486 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 NLRP10Q86W26 655 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 TRMT2BQ96GJ1 504 aaKnown RBP5.77□□□□□ -1.49
CD46-218ENST00000496723 TMEM169Q96HH4 297 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 IPO9Q96P70 1041 aaKnown RBP5.77□□□□□ -1.49
CD46-218ENST00000496723 PHF20Q9BVI0 1012 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 GPR27Q9NS67 375 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 ST6GALNAC2Q9UJ37 374 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 ZNF652Q9Y2D9 606 aa5.77□□□□□ -1.49
CD46-218ENST00000496723 CYR61O00622 381 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 CYP1A1P04798 512 aaPredicted RBP5.76□□□□□ -1.49
CD46-218ENST00000496723 STAT5AP42229 794 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 ADAM9Q13443 819 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 NTRK3Q16288 839 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 FAM209AQ5JX71 171 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 FOXB2Q5VYV0 432 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 KCNT2Q6UVM3 1135 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 SCUBE1Q8IWY4 988 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 SH3RF3Q8TEJ3 882 aaPredicted RBP5.76□□□□□ -1.49
CD46-218ENST00000496723 DCAF4Q8WV16 495 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 CLIC6Q96NY7 704 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 TMEM168Q9H0V1 697 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 L2HGDHQ9H9P8 463 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 CLDND1Q9NY35 253 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 PPP4R1LQ9P1A2 415 aa5.76□□□□□ -1.49
CD46-218ENST00000496723 CDK11AQ9UQ88 783 aaPredicted RBP5.76□□□□□ -1.49
CD46-218ENST00000496723 TRBV23-1A0A0A0MS06 115 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 NPEPPSL1A6NEC2 478 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 HGSO14964 777 aaPredicted RBP5.75□□□□□ -1.49
CD46-218ENST00000496723 MSCO60682 206 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 IL13P35225 146 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 NFE2L2Q16236 605 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 PKN3Q6P5Z2 889 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 RSPO2Q6UXX9 243 aaPredicted RBP5.75□□□□□ -1.49
CD46-218ENST00000496723 SPRED1Q7Z699 444 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 DNERQ8NFT8 737 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 TOE1Q96GM8 510 aaKnown RBP5.75□□□□□ -1.49
CD46-218ENST00000496723 EXOC2Q96KP1 924 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 YTHDC1Q96MU7 727 aaKnown RBP5.75□□□□□ -1.49
CD46-218ENST00000496723 WRNIP1Q96S55 665 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 KLC2Q9H0B6 622 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 ZSWIM4Q9H7M6 989 aa5.75□□□□□ -1.49
CD46-218ENST00000496723 COA3Q9Y2R0 106 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms