RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 CSRNP2Q9H175 543 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 FOXP1Q9H334 677 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 METTL14Q9HCE5 456 aaKnown RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 DDX19AQ9NUU7 478 aaKnown RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 CD2APQ9Y5K6 639 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 PKD1L2Q7Z442 2459 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 TIAM2Q8IVF5 1701 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 ROBO3Q96MS0 1386 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 A0A087X0B3 334 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 VWA3AA6NCI4 1184 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 ZBBXA8MT70 800 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 POLR2DO15514 142 aaKnown RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 PARP1P09874 1014 aaKnown RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 CALM1P0DP23 149 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 CALM2P0DP24 149 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 CALM3P0DP25 149 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 KIF5BP33176 963 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 KRT2P35908 639 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 SYKP43405 635 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 ZNF165P49910 485 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 ZRSR1Q15695 479 aaKnown RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 ZYXQ15942 572 aaKnown RBP6.92□□□□□ -1.3
SSBP1-213ENST00000496622 INF2Q27J81 1249 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 DLK2Q6UY11 383 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 SIAH1Q8IUQ4 282 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 MORC4Q8TE76 937 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 GJA10Q969M2 543 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 PLIN2Q99541 437 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 CBX8Q9HC52 389 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 PIM2Q9P1W9 311 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 PCDHB9Q9Y5E1 797 aa6.92□□□□□ -1.3
SSBP1-213ENST00000496622 LTBP1Q14766 1721 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 PP2D1A8MPX8 630 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 NFKBIEO00221 500 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 ADCY5O95622 1261 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 GH2P01242 217 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 SETSIPP0DME0 302 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 EEF2P13639 858 aaKnown RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 ECE1P42892 770 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 DGKZQ13574 1117 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 GRM4Q14833 912 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 TERF2Q15554 542 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 IL17AQ16552 155 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 CERKLQ49MI3 558 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 GOLGA6L1Q8N7Z2 621 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 UHMK1Q8TAS1 419 aaKnown RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 ZNF287Q9HBT7 754 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 TMEM260Q9NX78 707 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 FBXO2Q9UK22 296 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 NID2Q14112 1375 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 A0A1W2PRG0 241 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 USP17L10C9JJH3 530 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 PPP1R11O60927 126 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 COBLO75128 1261 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 HLA-DOAP06340 250 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 MYBL2P10244 700 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 TOP1P11387 765 aaKnown RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 XBP1P17861 261 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 CMA1P23946 247 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 WDR4P57081 412 aaKnown RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 FOXK2Q01167 660 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 PTK2Q05397 1052 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 RILPL1Q5EBL4 403 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 ARMC3Q5W041 872 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 NAIF1Q69YI7 327 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 ELOA2Q8IYF1 753 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 PDCL2Q8N4E4 241 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 CDK15Q96Q40 435 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 SPOCK3Q9BQ16 436 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 YIPF2Q9BWQ6 316 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 GLIS2Q9BZE0 524 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 PI4KBQ9UBF8 816 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 KCNH3Q9ULD8 1083 aa6.91□□□□□ -1.3
SSBP1-213ENST00000496622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.91□□□□□ -1.3
SSBP1-213ENST00000496622 TNRC18O15417 2968 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-213ENST00000496622 TRIM75PA6NK02 468 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 POM121CA8CG34 1229 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 STXBP3O00186 592 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 AXIN1O15169 862 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 TTLL1O95922 423 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 AFMP43652 599 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 RCAN1P53805 252 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 NAPAP54920 295 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
SSBP1-213ENST00000496622 DLGAP5Q15398 846 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 DALRD3Q5D0E6 543 aaKnown RBP6.9□□□□□ -1.3
SSBP1-213ENST00000496622 INTS6LQ5JSJ4 861 aaKnown RBP6.9□□□□□ -1.3
SSBP1-213ENST00000496622 ATL3Q6DD88 541 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 RTKN2Q8IZC4 609 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 C17orf53Q8N3J3 647 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-213ENST00000496622 RSPH1Q8WYR4 309 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 ANKS1AQ92625 1134 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 KLF16Q9BXK1 252 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-213ENST00000496622 TMEM60Q9H2L4 133 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms