RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 RAG1P15918 1043 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 ARHGAP4P98171 946 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 MTMR1Q13613 665 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 SESTD1Q86VW0 696 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 TDHQ8IZJ6 230 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 REXO1Q8N1G1 1221 aaKnown RBP18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 GTF3C6Q969F1 213 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 EHMT1Q9H9B1 1298 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 KCNH7Q9NS40 1196 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 LAMA2P24043 3122 aaKnown RBP18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 STK36Q9NRP7 1315 aa18.43■□□□□ 0.54
DNMT3A-215ENST00000496570 IGLV3-22A0A075B6J6 115 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 FAM86B1E9PN63 330 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 MEIS1O00470 390 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 SOX1O00570 391 aaPredicted RBP18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 CYP3A4P08684 503 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 FAM86B2P0C5J1 330 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 ARP10275 920 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 GNA11P29992 359 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 PSEN2P49810 448 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 PTPN11Q06124 597 aaPredicted RBP18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 HIC1Q14526 733 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 MFSD10Q14728 455 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 CEP55Q53EZ4 464 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 CCDC148Q8NFR7 591 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 NOC4LQ9BVI4 516 aaKnown RBP18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
DNMT3A-215ENST00000496570 MAFGO15525 162 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 LGALS2P05162 132 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 CYP2C9P11712 490 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 ITGB3BPQ13352 177 aaPredicted RBP18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 KIAA0753Q2KHM9 967 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 C9orf50Q5SZB4 431 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 GDF6Q6KF10 455 aaPredicted RBP18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 MFSD5Q6N075 450 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 CPLX2Q6PUV4 134 aaKnown RBP18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 DAGLBQ8NCG7 672 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 VWCEQ96DN2 955 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 CDHR1Q96JP9 859 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 PPP1R12CQ9BZL4 782 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 WNT8AQ9H1J5 351 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 GJB4Q9NTQ9 266 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 PKD2L1Q9P0L9 805 aa18.41■□□□□ 0.54
DNMT3A-215ENST00000496570 CYP2C18P33260 490 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 C16orf59Q7L2K0 433 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 NIPA1Q7RTP0 329 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 NSUN7Q8NE18 718 aaKnown RBP18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 ALG1Q9BT22 464 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 HIPK3Q9H422 1215 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 AGO4Q9HCK5 861 aaKnown RBP18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 HDAC6Q9UBN7 1215 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 GTF2IRD1Q9UHL9 959 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 PCDHA4Q9UN74 947 aa18.4■□□□□ 0.54
DNMT3A-215ENST00000496570 GSTTP1A0A1W2PQM5 241 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 CDKL5O76039 1030 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 HOXC8P31273 242 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 NLRP5P59047 1200 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 SP4Q02446 784 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 FPGSQ05932 587 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 SHHQ15465 462 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 TRIM50Q86XT4 487 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 FAM177A1Q8N128 213 aaPredicted RBP18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 GIMAP8Q8ND71 665 aaPredicted RBP18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 BICD2Q8TD16 824 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 DHX38Q92620 1227 aaKnown RBP18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 LENG9Q96B70 501 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 PHF20Q9BVI0 1012 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 KATNAL1Q9BW62 490 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 KCNJ14Q9UNX9 436 aa18.39■□□□□ 0.53
DNMT3A-215ENST00000496570 H3BRB1 525 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 NOP56O00567 594 aaKnown RBP18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 DHX15O43143 795 aaKnown RBP18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 SUPT20HL2P0C7V6 817 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 CSF2RAP15509 400 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 CIITAP33076 1130 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 LRIT3Q3SXY7 679 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 BLIDQ8IZY5 108 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 PCYT2Q99447 389 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 TUT1Q9H6E5 874 aaKnown RBP18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 ORC3Q9UBD5 711 aaPredicted RBP18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 NFASCO94856 1347 aa18.38■□□□□ 0.53
DNMT3A-215ENST00000496570 JAK2O60674 1132 aa18.37■□□□□ 0.53
DNMT3A-215ENST00000496570 TCF7P36402 384 aaPredicted RBP18.37■□□□□ 0.53
DNMT3A-215ENST00000496570 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
DNMT3A-215ENST00000496570 PTGISQ16647 500 aa18.37■□□□□ 0.53
DNMT3A-215ENST00000496570 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
DNMT3A-215ENST00000496570 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
DNMT3A-215ENST00000496570 RBAK-RBAKDNI3L0D1 243 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 CCNE2O96020 404 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 CCL23P55773 120 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 GALNT17Q6IS24 598 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 PLA2G4DQ86XP0 818 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 C7orf31Q8N865 590 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 SEPT1Q8WYJ6 367 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 WNT8BQ93098 351 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 LRCH3Q96II8 777 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms