RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 GABPB1Q06547 395 aaPredicted RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 C2orf54Q08AI8 447 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
CDCA7-208ENST00000496441 NEK11Q8NG66 645 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 PIGOQ8TEQ8 1089 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 ZDHHC15Q96MV8 337 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 FAM53CQ9NYF3 392 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 RGL1Q9NZL6 768 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
CDCA7-208ENST00000496441 A0A1W2PRG0 241 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 RSPH10B2B2RC85 870 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 ZBTB39O15060 712 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 RSPH10BP0C881 870 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 RNASE9P60153 205 aaKnown RBP12.77□□□□□ -0.36
CDCA7-208ENST00000496441 DACT2Q5SW24 774 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 LRRC55Q6ZSA7 311 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 FBXO11Q86XK2 927 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 SECISBP2LQ93073 1101 aaKnown RBP12.77□□□□□ -0.36
CDCA7-208ENST00000496441 CCDC102AQ96A19 550 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 VEZTQ9HBM0 779 aa12.77□□□□□ -0.36
CDCA7-208ENST00000496441 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.36
CDCA7-208ENST00000496441 PLIN4Q96Q06 1357 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 FAM193AP78312 1265 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 AMPD2Q01433 879 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 TMEM119Q4V9L6 283 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 CCDC17Q96LX7 622 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 SCN9AQ15858 1988 aa12.77□□□□□ -0.37
CDCA7-208ENST00000496441 CCDC151A5D8V7 595 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 H3BQF6 201 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 PPIP5K2O43314 1243 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 PRPF6O94906 941 aaKnown RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 ADAM9Q13443 819 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 RAPGEF1Q13905 1077 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 MEA1Q16626 185 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 DCAF17Q5H9S7 520 aaPredicted RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 LSM14BQ9BX40 385 aaKnown RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 PCDHA13Q9Y5I0 950 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 COL4A3BPQ9Y5P4 624 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 CLIC2O15247 247 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 ACTN1P12814 892 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 KCNA1Q09470 495 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 WHAMMP3Q1A5X7 153 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 UTP14CQ5TAP6 766 aaKnown RBP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 KSR1Q8IVT5 923 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 CCDC65Q8IXS2 484 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
CDCA7-208ENST00000496441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDCA7-208ENST00000496441 CYP11B2P19099 503 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 KCNMA1Q12791 1236 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 CTTNQ14247 550 aaKnown RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 ARSHQ5FYA8 562 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 NFRKBQ6P4R8 1299 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 SCFD1Q8WVM8 642 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 SALL4Q9UJQ4 1053 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 BRWD3Q6RI45 1802 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 DDX39AO00148 427 aaKnown RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 MAGEA1P43355 309 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 LRRC63Q05C16 580 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 PLS1Q14651 629 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 SKIDA1Q1XH10 827 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 BEND6Q5SZJ8 279 aaPredicted RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 STRIP1Q5VSL9 837 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 MAEAQ7L5Y9 396 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 RETREG2Q8NC44 543 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 NT5C3AQ9H0P0 336 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 VPS18Q9P253 973 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 PSMD14O00487 310 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 BMP3P12645 472 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 NR2F2P24468 414 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 VAV2P52735 878 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 SLC7A5Q01650 507 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 SYDE2Q5VT97 1194 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 SFR1Q86XK3 245 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 TPH2Q8IWU9 490 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms