RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 AFG1LQ8WV93 481 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-226ENST00000496026 TCEAL9Q9UHQ7 104 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 MYADML2A6NDP7 307 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 DNM1LO00429 736 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 NOP56O00567 594 aaKnown RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 WNT7AO00755 349 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 MSH4O15457 936 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 NEMFO60524 1076 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 FARP2O94887 1054 aaPredicted RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 IRX5P78411 483 aaPredicted RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 ITGB3BPQ13352 177 aaPredicted RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 ZNF174Q15697 407 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 ANKLE1Q8NAG6 615 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 PCSK9Q8NBP7 692 aaKnown RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 EMID1Q96A84 441 aaPredicted RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 ZSCAN16Q9H4T2 348 aaPredicted RBP16.7■□□□□ 0.26
HDAC9-226ENST00000496026 BCAS3Q9H6U6 928 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 TBC1D22BQ9NU19 505 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 NFASCO94856 1347 aa16.7■□□□□ 0.26
HDAC9-226ENST00000496026 DDX39AO00148 427 aaKnown RBP16.69■□□□□ 0.26
HDAC9-226ENST00000496026 CST5P28325 142 aaPredicted RBP16.69■□□□□ 0.26
HDAC9-226ENST00000496026 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
HDAC9-226ENST00000496026 NKX3-2P78367 333 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 RESTQ13127 1097 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 NBR1Q14596 966 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 KCNA10Q16322 511 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 LRCH2Q5VUJ6 765 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 KLHDC9Q8NEP7 349 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 PPTC7Q8NI37 304 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 RIT2Q99578 217 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 JPH1Q9HDC5 661 aaPredicted RBP16.69■□□□□ 0.26
HDAC9-226ENST00000496026 SLC9A2Q9UBY0 812 aa16.69■□□□□ 0.26
HDAC9-226ENST00000496026 A6NJR5 290 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 CTAGE5O15320 804 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 GAS7O60861 476 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 MMP3P08254 477 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 MYL3P08590 195 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 ZSCAN22P10073 491 aaPredicted RBP16.68■□□□□ 0.26
HDAC9-226ENST00000496026 ORC2Q13416 577 aaPredicted RBP16.68■□□□□ 0.26
HDAC9-226ENST00000496026 CALCRLQ16602 461 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 DGKDQ16760 1214 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 HSDL1Q3SXM5 330 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 ETNPPLQ8TBG4 499 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 SLC5A5Q92911 643 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 FAM20AQ96MK3 541 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 TSEN34Q9BSV6 310 aaKnown RBP16.68■□□□□ 0.26
HDAC9-226ENST00000496026 TEKT3Q9BXF9 490 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 PCDHB6Q9Y5E3 794 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 MYH7BA7E2Y1 1941 aa16.68■□□□□ 0.26
HDAC9-226ENST00000496026 KIAA1217Q5T5P2 1943 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 TBX3O15119 743 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 DHX15O43143 795 aaKnown RBP16.67■□□□□ 0.26
HDAC9-226ENST00000496026 KPNA6O60684 536 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 ASGR1P07306 291 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 ACLYP53396 1101 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 PKP1Q13835 747 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 SLFN12Q8IYM2 578 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 SEPT1Q8WYJ6 367 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 GJA10Q969M2 543 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 GPR20Q99678 358 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 KCNMB3Q9NPA1 279 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 POLR3EQ9NVU0 708 aa16.67■□□□□ 0.26
HDAC9-226ENST00000496026 MOXD2PA6NHM9 499 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 CHMP2AO43633 222 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 PSMD10O75832 226 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 F13A1P00488 732 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 ACTR2P61160 394 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 KRT76Q01546 638 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 CCSAPQ6IQ19 270 aaPredicted RBP16.66■□□□□ 0.26
HDAC9-226ENST00000496026 FERMT2Q96AC1 680 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 VTI1AQ96AJ9 217 aa16.66■□□□□ 0.26
HDAC9-226ENST00000496026 PPFIA4O75335 1185 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 CCNE2O96020 404 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 OR52Z1P0C646 297 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 TXKP42681 527 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
HDAC9-226ENST00000496026 ZNF746Q6NUN9 644 aaPredicted RBP16.65■□□□□ 0.26
HDAC9-226ENST00000496026 FAM173BQ6P4H8 233 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 CXCL17Q6UXB2 119 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 DIS3LQ8TF46 1054 aaKnown RBP16.65■□□□□ 0.26
HDAC9-226ENST00000496026 HAS1Q92839 578 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 PAWRQ96IZ0 340 aaKnown RBP16.65■□□□□ 0.26
HDAC9-226ENST00000496026 SENP6Q9GZR1 1112 aaPredicted RBP16.65■□□□□ 0.26
HDAC9-226ENST00000496026 TMEM60Q9H2L4 133 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 C11orf49Q9H6J7 331 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.65■□□□□ 0.26
HDAC9-226ENST00000496026 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 TELO2Q9Y4R8 837 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 ELP1O95163 1332 aa16.65■□□□□ 0.26
HDAC9-226ENST00000496026 A0A1W2PQ45 241 aaPredicted RBP16.64■□□□□ 0.25
HDAC9-226ENST00000496026 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 A0A1W2PQY0 241 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 WDR64B1ANS9 1081 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 CABYRO75952 493 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms