RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 PTCH2Q9Y6C5 1203 aa7.86□□□□□ -1.15
NCKAP1-208ENST00000495619 SH3D21A4FU49 640 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 WNT9AO14904 365 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 PLA2G1BP04054 148 aaKnown RBP7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 KCNC1P48547 511 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 CRY1Q16526 586 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 VMACQ2NL98 169 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 LILRB2Q8N423 598 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 MARCH10Q8NA82 808 aaPredicted RBP7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 CLIC6Q96NY7 704 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 TMEM209Q96SK2 561 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 GORASP1Q9BQQ3 440 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 PARD6AQ9NPB6 346 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 LUC7LQ9NQ29 371 aaKnown RBP7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 PCDHA9Q9Y5H5 950 aa7.85□□□□□ -1.15
NCKAP1-208ENST00000495619 ARVCFO00192 962 aa7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 CRTAMO95727 393 aa7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 SARSP49591 514 aaKnown RBP7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 TUSC3Q13454 348 aa7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 SMAD4Q13485 552 aaKnown RBP7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 GPR19Q15760 415 aa7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 TEPPQ6URK8 271 aa7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 C16orf59Q7L2K0 433 aa7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 FAM26EQ8N5C1 309 aa7.84□□□□□ -1.15
NCKAP1-208ENST00000495619 FFAR3O14843 346 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 SRGAP2CP0DJJ0 459 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 CR1LQ2VPA4 569 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 VWA3BQ502W6 1294 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 TRIM61Q5EBN2 209 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 HABP4Q5JVS0 413 aaKnown RBP7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 LIPIQ6XZB0 460 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 KCTD1Q719H9 257 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 PCDH19Q8TAB3 1148 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 NOX5Q96PH1 765 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 SLC52A2Q9HAB3 445 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 HSPBP1Q9NZL4 362 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 RAPGEFL1Q9UHV5 662 aa7.83□□□□□ -1.16
NCKAP1-208ENST00000495619 PLD2O14939 933 aa7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 ITGA1P56199 1179 aa7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 GRIN1Q05586 938 aa7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 VASNQ6EMK4 673 aa7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 ARHGAP36Q6ZRI8 547 aa7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 CARFQ8N187 725 aa7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 NCOA5Q9HCD5 579 aaKnown RBP7.82□□□□□ -1.16
NCKAP1-208ENST00000495619 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 CCDC66A2RUB6 948 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 B4E1Z4 1266 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 KCNQ2O43526 872 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 TRIM13O60858 407 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 NPTXRO95502 500 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 LRG1P02750 347 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 INHBBP09529 407 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 RPL13P26373 211 aaKnown RBP7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 THBS2P35442 1172 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 DNM2P50570 870 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 SLURP1P55000 103 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 PAN2Q504Q3 1202 aaKnown RBP7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 SYNPOQ8N3V7 929 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 GSTCDQ8NEC7 633 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 SH3TC2Q8TF17 1288 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 CLEC4DQ8WXI8 215 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 KCNC2Q96PR1 638 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 PDGFDQ9GZP0 370 aaPredicted RBP7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 USP40Q9NVE5 1235 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 USP35Q9P2H5 1018 aa7.81□□□□□ -1.16
NCKAP1-208ENST00000495619 ENO2P09104 434 aaPredicted RBP7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 PYGMP11217 842 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 PDE6AP16499 860 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 FAHP16930 419 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 GJA4P35212 333 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 EPHA5P54756 1037 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 GJA9P57773 515 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 FNDC3BQ53EP0 1204 aaKnown RBP7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 PRAMEF18Q5VWM3 479 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 FAM124AQ86V42 546 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 ATP23Q9Y6H3 246 aa7.8□□□□□ -1.16
NCKAP1-208ENST00000495619 KRT15P19012 456 aa7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 BTBD8Q5XKL5 378 aa7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 TTLL10Q6ZVT0 673 aa7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 STK32CQ86UX6 486 aa7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 OSTM1Q86WC4 334 aa7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 TP53I13Q8NBR0 393 aaPredicted RBP7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 SLC7A14Q8TBB6 771 aa7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 SPATA6Q9NWH7 488 aaPredicted RBP7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 SRPK3Q9UPE1 567 aa7.79□□□□□ -1.16
NCKAP1-208ENST00000495619 FLT3P36888 993 aa7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 KIAA2012Q0VF49 1180 aa7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 FIGNQ5HY92 759 aa7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 TMC5Q6UXY8 1006 aa7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 BRAPQ7Z569 592 aa7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 DDX53Q86TM3 631 aaKnown RBP7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 HOMER1Q86YM7 354 aa7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 RBM12BQ8IXT5 1001 aaKnown RBP7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 ADGRG2Q8IZP9 1017 aa7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 CELF4Q9BZC1 486 aaKnown RBP7.78□□□□□ -1.16
NCKAP1-208ENST00000495619 CD244Q9BZW8 370 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms