RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 PSEN2P49810 448 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 EPHB4P54760 987 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 NLRP5P59047 1200 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 PTPN11Q06124 597 aaPredicted RBP16.41■□□□□ 0.22
SCAP-213ENST00000494938 MTMR1Q13613 665 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 MCTP2Q6DN12 878 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 SESTD1Q86VW0 696 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 REXO1Q8N1G1 1221 aaKnown RBP16.41■□□□□ 0.22
SCAP-213ENST00000494938 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 GTF3C6Q969F1 213 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 KCNH7Q9NS40 1196 aa16.41■□□□□ 0.22
SCAP-213ENST00000494938 FAM86B1E9PN63 330 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 FAM86B2P0C5J1 330 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 ZNF286BP0CG31 522 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 ST3GAL1Q11201 340 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 MFSD10Q14728 455 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 GIMAP8Q8ND71 665 aaPredicted RBP16.4■□□□□ 0.22
SCAP-213ENST00000494938 CCDC148Q8NFR7 591 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 CTAGE1Q96RT6 745 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 PCDHA4Q9UN74 947 aa16.4■□□□□ 0.22
SCAP-213ENST00000494938 GSTTP1A0A1W2PQM5 241 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 SUPT20HL2P0C7V6 817 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 CYP2C9P11712 490 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 CYP2C18P33260 490 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 FXR1P51114 621 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCAP-213ENST00000494938 HIC1Q14526 733 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 KIAA0753Q2KHM9 967 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
SCAP-213ENST00000494938 NIPA1Q7RTP0 329 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 TDHQ8IZJ6 230 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
SCAP-213ENST00000494938 NSUN7Q8NE18 718 aaKnown RBP16.39■□□□□ 0.21
SCAP-213ENST00000494938 ALG1Q9BT22 464 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
SCAP-213ENST00000494938 AGO4Q9HCK5 861 aaKnown RBP16.39■□□□□ 0.21
SCAP-213ENST00000494938 GJB4Q9NTQ9 266 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 PKD2L1Q9P0L9 805 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
SCAP-213ENST00000494938 HDAC6Q9UBN7 1215 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 KCNJ14Q9UNX9 436 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 LAMA3Q16787 3333 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 UMODL1Q5DID0 1318 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 STK36Q9NRP7 1315 aa16.39■□□□□ 0.21
SCAP-213ENST00000494938 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 H3BRB1 525 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
SCAP-213ENST00000494938 LGALS2P05162 132 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 CIITAP33076 1130 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 ZNF76P36508 570 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
SCAP-213ENST00000494938 SHHQ15465 462 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 GALNT17Q6IS24 598 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 DAGLBQ8NCG7 672 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 SEPT1Q8WYJ6 367 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 PHF20Q9BVI0 1012 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 KATNAL1Q9BW62 490 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 PPP1R12CQ9BZL4 782 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 HIPK3Q9H422 1215 aa16.38■□□□□ 0.21
SCAP-213ENST00000494938 TUT1Q9H6E5 874 aaKnown RBP16.38■□□□□ 0.21
SCAP-213ENST00000494938 TRIOBPQ9H2D6 2365 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 JAK2O60674 1132 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 ZNF200P98182 395 aaPredicted RBP16.37■□□□□ 0.21
SCAP-213ENST00000494938 SP4Q02446 784 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 C9orf50Q5SZB4 431 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 PLA2G4DQ86XP0 818 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 C7orf31Q8N865 590 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 VWCEQ96DN2 955 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 GTF2IRD1Q9UHL9 959 aa16.37■□□□□ 0.21
SCAP-213ENST00000494938 LAMA2P24043 3122 aaKnown RBP16.37■□□□□ 0.21
SCAP-213ENST00000494938 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
SCAP-213ENST00000494938 CSF2RAP15509 400 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 USP11P51784 963 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 CCL23P55773 120 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 FPGSQ05932 587 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 PTGISQ16647 500 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 LRIT3Q3SXY7 679 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 UTP14CQ5TAP6 766 aaKnown RBP16.36■□□□□ 0.21
SCAP-213ENST00000494938 LENG9Q96B70 501 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 PCYT2Q99447 389 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 WNT8AQ9H1J5 351 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 NFASCO94856 1347 aa16.36■□□□□ 0.21
SCAP-213ENST00000494938 SOX1O00570 391 aaPredicted RBP16.35■□□□□ 0.21
SCAP-213ENST00000494938 HOXC8P31273 242 aa16.35■□□□□ 0.21
SCAP-213ENST00000494938 TCF7P36402 384 aaPredicted RBP16.35■□□□□ 0.21
SCAP-213ENST00000494938 TRIM50Q86XT4 487 aa16.35■□□□□ 0.21
SCAP-213ENST00000494938 TMEM199Q8N511 208 aa16.35■□□□□ 0.21
SCAP-213ENST00000494938 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
SCAP-213ENST00000494938 TBCKQ8TEA7 893 aa16.35■□□□□ 0.21
SCAP-213ENST00000494938 DHX38Q92620 1227 aaKnown RBP16.35■□□□□ 0.21
SCAP-213ENST00000494938 UIMC1Q96RL1 719 aa16.35■□□□□ 0.21
SCAP-213ENST00000494938 RNPEPQ9H4A4 650 aa16.35■□□□□ 0.21
SCAP-213ENST00000494938 JPH1Q9HDC5 661 aaPredicted RBP16.35■□□□□ 0.21
SCAP-213ENST00000494938 SLC9A2Q9UBY0 812 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms