RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 PRO3102Q9H379 93 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 MLXIPQ9HAP2 919 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 PKD2L1Q9P0L9 805 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 SCN10AQ9Y5Y9 1956 aa19.53■□□□□ 0.72
SNX17-209ENST00000494893 DOCK5Q9H7D0 1870 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 CD4P01730 458 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 ZNF286BP0CG31 522 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 ITGB8P26012 769 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 ITGB3BPQ13352 177 aaPredicted RBP19.52■□□□□ 0.72
SNX17-209ENST00000494893 BECN1Q14457 450 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 DGKDQ16760 1214 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 LENG9Q96B70 501 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 GPR20Q99678 358 aa19.52■□□□□ 0.72
SNX17-209ENST00000494893 SH2B1Q9NRF2 756 aaPredicted RBP19.52■□□□□ 0.72
SNX17-209ENST00000494893 HAS3O00219 553 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 MAFGO15525 162 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 F2P00734 622 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 CLTBP09497 229 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 CIITAP33076 1130 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 GALNT17Q6IS24 598 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 NIPA1Q7RTP0 329 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 CDHR1Q96JP9 859 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 GDF15Q99988 308 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 C16orf70Q9BSU1 422 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 TRPV6Q9H1D0 765 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 AGO4Q9HCK5 861 aaKnown RBP19.51■□□□□ 0.71
SNX17-209ENST00000494893 TBX21Q9UL17 535 aa19.51■□□□□ 0.71
SNX17-209ENST00000494893 KIAA0355O15063 1070 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 PPFIA4O75335 1185 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 MAGEA10P43363 369 aaPredicted RBP19.5■□□□□ 0.71
SNX17-209ENST00000494893 MCM2P49736 904 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 FOSBP53539 338 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 EARS2Q5JPH6 523 aaKnown RBP19.5■□□□□ 0.71
SNX17-209ENST00000494893 TBCKQ8TEA7 893 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 WASF1Q92558 559 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 TNFRSF25Q93038 417 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 IPO9Q96P70 1041 aaKnown RBP19.5■□□□□ 0.71
SNX17-209ENST00000494893 LLPHQ9BRT6 129 aaKnown RBP19.5■□□□□ 0.71
SNX17-209ENST00000494893 PRDM5Q9NQX1 630 aaPredicted RBP19.5■□□□□ 0.71
SNX17-209ENST00000494893 MYH7BA7E2Y1 1941 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 LTBP2Q14767 1821 aa19.5■□□□□ 0.71
SNX17-209ENST00000494893 RANBP2P49792 3224 aaKnown RBP19.49■□□□□ 0.71
SNX17-209ENST00000494893 GSTTP1A0A1W2PQM5 241 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 FAM205CA6NFA0 338 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 DCDC2CA8MYV0 355 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 DHX15O43143 795 aaKnown RBP19.49■□□□□ 0.71
SNX17-209ENST00000494893 B4GALT4O60513 344 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 LGALS2P05162 132 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 ZNF76P36508 570 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 PSEN2P49810 448 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 SP4Q02446 784 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 CHRDL2Q6WN34 429 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 PLA2G4DQ86XP0 818 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 HSCBQ8IWL3 235 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 TMX3Q96JJ7 454 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 UIMC1Q96RL1 719 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 CTAGE1Q96RT6 745 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 COLQQ9Y215 455 aaPredicted RBP19.49■□□□□ 0.71
SNX17-209ENST00000494893 MROH7Q68CQ1 1323 aa19.49■□□□□ 0.71
SNX17-209ENST00000494893 NR5A1Q13285 461 aa19.48■□□□□ 0.71
SNX17-209ENST00000494893 HIC1Q14526 733 aa19.48■□□□□ 0.71
SNX17-209ENST00000494893 NFRKBQ6P4R8 1299 aa19.48■□□□□ 0.71
SNX17-209ENST00000494893 TRIM50Q86XT4 487 aa19.48■□□□□ 0.71
SNX17-209ENST00000494893 GIMAP8Q8ND71 665 aaPredicted RBP19.48■□□□□ 0.71
SNX17-209ENST00000494893 SEZ6LQ9BYH1 1024 aa19.48■□□□□ 0.71
SNX17-209ENST00000494893 TRMT13Q9NUP7 481 aaKnown RBP19.48■□□□□ 0.71
SNX17-209ENST00000494893 TMEM39AQ9NV64 488 aa19.48■□□□□ 0.71
SNX17-209ENST00000494893 NFASCO94856 1347 aa19.48■□□□□ 0.71
SNX17-209ENST00000494893 NOP56O00567 594 aaKnown RBP19.47■□□□□ 0.71
SNX17-209ENST00000494893 TDP2O95551 362 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 MMP1P03956 469 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 XBP1P17861 261 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 USP11P51784 963 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 MDM2Q00987 491 aaPredicted RBP19.47■□□□□ 0.71
SNX17-209ENST00000494893 MFSD10Q14728 455 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 INF2Q27J81 1249 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 KIAA0753Q2KHM9 967 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 KRT40Q6A162 431 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 KRT25Q7Z3Z0 450 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 MBOAT7Q96N66 472 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 PCYT2Q99447 389 aa19.47■□□□□ 0.71
SNX17-209ENST00000494893 CYP3A7-CYP3A51PA0A087WV96 503 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 CCNE2O96020 404 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 CYP3A7P24462 503 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 NONOQ15233 471 aaKnown RBP eCLIP19.46■□□□□ 0.71
SNX17-209ENST00000494893 PRR16Q569H4 304 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 FAM47CQ5HY64 1035 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 GDF6Q6KF10 455 aaPredicted RBP19.46■□□□□ 0.71
SNX17-209ENST00000494893 SESTD1Q86VW0 696 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 BADQ92934 168 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 JPH1Q9HDC5 661 aaPredicted RBP19.46■□□□□ 0.71
SNX17-209ENST00000494893 HDAC6Q9UBN7 1215 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 SLC9A2Q9UBY0 812 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 UMODL1Q5DID0 1318 aa19.46■□□□□ 0.71
SNX17-209ENST00000494893 BTBD18B2RXH4 712 aa19.45■□□□□ 0.7
SNX17-209ENST00000494893 H3BRB1 525 aa19.45■□□□□ 0.7
SNX17-209ENST00000494893 K7ELQ4 463 aaPredicted RBP19.45■□□□□ 0.7
SNX17-209ENST00000494893 TLR3O15455 904 aaKnown RBP19.45■□□□□ 0.7
SNX17-209ENST00000494893 KRT2P35908 639 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms