RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 FRMPD4Q14CM0 1322 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 ERICH2A1L162 156 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 LGALS2P05162 132 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 SMIM10L2AP0DMW4 78 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 SMIM10L2BP0DMW5 78 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 NEDD9Q14511 834 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 PTPROQ16827 1216 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 FAM117BQ6P1L5 589 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 HOMER1Q86YM7 354 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 MYOCDQ8IZQ8 938 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 MRPL38Q96DV4 380 aaKnown RBP16.93■□□□□ 0.3
PCCB-219ENST00000494742 INPP4AQ96PE3 977 aaPredicted RBP16.93■□□□□ 0.3
PCCB-219ENST00000494742 PIGSQ96S52 555 aa16.93■□□□□ 0.3
PCCB-219ENST00000494742 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
PCCB-219ENST00000494742 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 PI4K2BG5E9Z4 385 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 NOP56O00567 594 aaKnown RBP16.92■□□□□ 0.3
PCCB-219ENST00000494742 SART3Q15020 963 aaKnown RBP16.92■□□□□ 0.3
PCCB-219ENST00000494742 SLC35G1Q2M3R5 365 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 PUS10Q3MIT2 529 aaKnown RBP16.92■□□□□ 0.3
PCCB-219ENST00000494742 METTL7BQ6UX53 244 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 FCHSD1Q86WN1 690 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 APBB2Q92870 758 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 TOP1MTQ969P6 601 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 C17orf80Q9BSJ5 609 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 RNPEPQ9H4A4 650 aa16.92■□□□□ 0.3
PCCB-219ENST00000494742 BRWD1Q9NSI6 2320 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 IFIT3O14879 490 aaKnown RBP16.91■□□□□ 0.3
PCCB-219ENST00000494742 TREHO43280 583 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 FIBPO43427 364 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 CYTH3O43739 400 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 SORBS3O60504 671 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 TROAPQ12815 778 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 EPC2Q52LR7 807 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 XRRA1Q6P2D8 792 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 RUFY2Q8WXA3 655 aa16.91■□□□□ 0.3
PCCB-219ENST00000494742 GPKOWQ92917 476 aaPredicted RBP eCLIP16.91■□□□□ 0.31e-9■■■■□ 25.5
PCCB-219ENST00000494742 ZNF215Q9UL58 517 aaPredicted RBP16.91■□□□□ 0.3
PCCB-219ENST00000494742 RALGAPA2Q2PPJ7 1873 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 H3BNC9 293 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 MRPS9P82933 396 aaKnown RBP16.9■□□□□ 0.3
PCCB-219ENST00000494742 TIGD5Q53EQ6 642 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 RALYLQ86SE5 291 aaKnown RBP16.9■□□□□ 0.3
PCCB-219ENST00000494742 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 YME1L1Q96TA2 773 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 GPR20Q99678 358 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 SENP7Q9BQF6 1050 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 IL25Q9H293 177 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 NLRC5Q86WI3 1866 aa16.9■□□□□ 0.3
PCCB-219ENST00000494742 CYP21A2P08686 494 aa16.89■□□□□ 0.29
PCCB-219ENST00000494742 KCNA5P22460 613 aa16.89■□□□□ 0.29
PCCB-219ENST00000494742 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
PCCB-219ENST00000494742 ADAM17P78536 824 aa16.89■□□□□ 0.29
PCCB-219ENST00000494742 WTAPQ15007 396 aa16.89■□□□□ 0.29
PCCB-219ENST00000494742 CYFIP1Q7L576 1253 aa16.89■□□□□ 0.29
PCCB-219ENST00000494742 GIMAP8Q8ND71 665 aaPredicted RBP16.89■□□□□ 0.29
PCCB-219ENST00000494742 NCOA7Q8NI08 942 aa16.89■□□□□ 0.29
PCCB-219ENST00000494742 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.89■□□□□ 0.29
PCCB-219ENST00000494742 BAZ2BQ9UIF8 2168 aaKnown RBP16.89■□□□□ 0.29
PCCB-219ENST00000494742 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
PCCB-219ENST00000494742 PCNX4Q63HM2 1172 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 CATIPQ7Z7H3 387 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 RPAINQ86UA6 219 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 TMEM192Q8IY95 271 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 GJD3Q8N144 294 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 NEK9Q8TD19 979 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 KHSRPQ92945 711 aaKnown RBP eCLIP16.88■□□□□ 0.293e-9■■■□□ 16.1
PCCB-219ENST00000494742 ZFP91Q96JP5 570 aaPredicted RBP16.88■□□□□ 0.29
PCCB-219ENST00000494742 BCAS3Q9H6U6 928 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 CD320Q9NPF0 282 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 C11orf16Q9NQ32 467 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 SETD4Q9NVD3 440 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 NRCAMQ92823 1304 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 DOCK5Q9H7D0 1870 aa16.88■□□□□ 0.29
PCCB-219ENST00000494742 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.87■□□□□ 0.29
PCCB-219ENST00000494742 GRXCR2A6NFK2 248 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 PIK3CDO00329 1044 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 SEMA3FQ13275 785 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 GPM6BQ13491 265 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 COL19A1Q14993 1142 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 TTC22Q5TAA0 569 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 PTCRAQ6ISU1 281 aaPredicted RBP16.87■□□□□ 0.29
PCCB-219ENST00000494742 NLRX1Q86UT6 975 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 BANK1Q8NDB2 785 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 SMARCC2Q8TAQ2 1214 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 CUL5Q93034 780 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 SPZ1Q9BXG8 430 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 IFIH1Q9BYX4 1025 aaKnown RBP16.87■□□□□ 0.29
PCCB-219ENST00000494742 FAM50BQ9Y247 325 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 KAT6AQ92794 2004 aa16.87■□□□□ 0.29
PCCB-219ENST00000494742 E7EWF7 191 aa16.86■□□□□ 0.29
PCCB-219ENST00000494742 NCK2O43639 380 aa16.86■□□□□ 0.29
PCCB-219ENST00000494742 CTSHP09668 335 aa16.86■□□□□ 0.29
PCCB-219ENST00000494742 ALADP13716 330 aa16.86■□□□□ 0.29
PCCB-219ENST00000494742 KIF5BP33176 963 aa16.86■□□□□ 0.29
PCCB-219ENST00000494742 TAF2Q6P1X5 1199 aa16.86■□□□□ 0.29
PCCB-219ENST00000494742 IGDCC4Q8TDY8 1250 aa16.86■□□□□ 0.29
PCCB-219ENST00000494742 LMBR1Q8WVP7 490 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms