RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 AGO4Q9HCK5 861 aaKnown RBP12.64□□□□□ -0.39
APTX-230ENST00000494649 STARD7Q9NQZ5 370 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 CYP3A4P08684 503 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 TGFB3P10600 412 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 KCNV1Q6PIU1 500 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 TRMT1LQ7Z2T5 733 aaKnown RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 LENG9Q96B70 501 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 ZNF577Q9BSK1 485 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 DDX25Q9UHL0 483 aaKnown RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 Q9Y3F1 56 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 A6NJR5 290 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 IPO5O00410 1097 aaKnown RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 CHMP2AO43633 222 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 CST5P28325 142 aaPredicted RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 LAMC2Q13753 1193 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 NEDD9Q14511 834 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 FOXD4L5Q5VV16 416 aaPredicted RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 MCTP2Q6DN12 878 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 METTL7BQ6UX53 244 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 FOXD4L4Q8WXT5 416 aaPredicted RBP12.63□□□□□ -0.39
APTX-230ENST00000494649 PHF24Q9UPV7 400 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
APTX-230ENST00000494649 MSH4O15457 936 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 PQBP1O60828 265 aaKnown RBP12.62□□□□□ -0.39
APTX-230ENST00000494649 USP11P51784 963 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 TRIM60Q495X7 471 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 PPTC7Q8NI37 304 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 CDHR1Q96JP9 859 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 SDF4Q9BRK5 362 aa12.62□□□□□ -0.39
APTX-230ENST00000494649 JPH1Q9HDC5 661 aaPredicted RBP12.62□□□□□ -0.39
APTX-230ENST00000494649 MOXD2PA6NHM9 499 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 ZEB2O60315 1214 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 MARK3P27448 753 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 CIITAP33076 1130 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 MCM7P33993 719 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 DGKDQ16760 1214 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 BRDTQ58F21 947 aaPredicted RBP12.61□□□□□ -0.39
APTX-230ENST00000494649 SLC39A5Q6ZMH5 540 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 NOSTRINQ8IVI9 506 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 TEX2Q8IWB9 1127 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 C7orf61Q8IZ16 206 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
APTX-230ENST00000494649 GPR20Q99678 358 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 CCNE2O96020 404 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 SYN1P17600 705 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
APTX-230ENST00000494649 SETQ01105 290 aaPredicted RBP12.61□□□□□ -0.39
APTX-230ENST00000494649 SENP7Q9BQF6 1050 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 SLC9A2Q9UBY0 812 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 GRIN2DO15399 1336 aa12.61□□□□□ -0.39
APTX-230ENST00000494649 SYT1P21579 422 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 RTP1P59025 263 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 ZNF174Q15697 407 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 KAT2BQ92831 832 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
APTX-230ENST00000494649 TSEN34Q9BSV6 310 aaKnown RBP12.6□□□□□ -0.39
APTX-230ENST00000494649 FOXP1Q9H334 677 aaPredicted RBP12.6□□□□□ -0.39
APTX-230ENST00000494649 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
APTX-230ENST00000494649 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 MAFGO15525 162 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 DHX15O43143 795 aaKnown RBP12.6□□□□□ -0.39
APTX-230ENST00000494649 MARCH6O60337 910 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 EVI5O60447 810 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 LGALS2P05162 132 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 ACTR2P61160 394 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 NBPF20Q3BBV1 942 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
APTX-230ENST00000494649 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
APTX-230ENST00000494649 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
APTX-230ENST00000494649 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 GAS7O60861 476 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 NKX3-2P78367 333 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 Q4G0T1 1027 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 NIPA1Q7RTP0 329 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
APTX-230ENST00000494649 C16orf70Q9BSU1 422 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 HTATIP2Q9BUP3 242 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 TCEAL9Q9UHQ7 104 aa12.59□□□□□ -0.39
APTX-230ENST00000494649 ZMYND8Q9ULU4 1186 aaPredicted RBP12.59□□□□□ -0.39
APTX-230ENST00000494649 RANBP2P49792 3224 aaKnown RBP12.59□□□□□ -0.39
APTX-230ENST00000494649 CYP3A7-CYP3A51PA0A087WV96 503 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 PPFIA4O75335 1185 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 CYP3A7P24462 503 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 U2AF2P26368 475 aaKnown RBP eCLIP12.58□□□□□ -0.399e-15■■■■■ 42.9
APTX-230ENST00000494649 TLE2Q04725 743 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 PKP1Q13835 747 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 FOXD4L6Q3SYB3 417 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms