RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 CYFIP1Q7L576 1253 aa27.56■■■□□ 2
TTC3-224ENST00000494243 LZTS2Q9BRK4 669 aa27.56■■■□□ 2
TTC3-224ENST00000494243 REV3LO60673 3130 aa27.55■■■□□ 2
TTC3-224ENST00000494243 PRRC2BQ5JSZ5 2229 aaKnown RBP27.55■■■□□ 2
TTC3-224ENST00000494243 TNFRSF10AO00220 468 aa27.55■■■□□ 2
TTC3-224ENST00000494243 FIBPO43427 364 aa27.55■■■□□ 2
TTC3-224ENST00000494243 SMIM10L2AP0DMW4 78 aa27.55■■■□□ 2
TTC3-224ENST00000494243 SMIM10L2BP0DMW5 78 aa27.55■■■□□ 2
TTC3-224ENST00000494243 IKBKEQ14164 716 aa27.55■■■□□ 2
TTC3-224ENST00000494243 NEDD9Q14511 834 aa27.55■■■□□ 2
TTC3-224ENST00000494243 PCNX4Q63HM2 1172 aa27.55■■■□□ 2
TTC3-224ENST00000494243 CMTR1Q8N1G2 835 aaKnown RBP27.55■■■□□ 2
TTC3-224ENST00000494243 TMTC2Q8N394 836 aa27.55■■■□□ 2
TTC3-224ENST00000494243 SMARCC2Q8TAQ2 1214 aa27.55■■■□□ 2
TTC3-224ENST00000494243 TMEM87BQ96K49 555 aa27.55■■■□□ 2
TTC3-224ENST00000494243 GPR20Q99678 358 aa27.55■■■□□ 2
TTC3-224ENST00000494243 ESYT1Q9BSJ8 1104 aa27.55■■■□□ 2
TTC3-224ENST00000494243 ZBED2Q9BTP6 218 aa27.55■■■□□ 2
TTC3-224ENST00000494243 USP26Q9BXU7 913 aa27.55■■■□□ 2
TTC3-224ENST00000494243 TSPYL2Q9H2G4 693 aaPredicted RBP27.55■■■□□ 2
TTC3-224ENST00000494243 RNPEPQ9H4A4 650 aa27.55■■■□□ 2
TTC3-224ENST00000494243 C17orf102A2RUQ5 167 aa27.54■■■□□ 2
TTC3-224ENST00000494243 GTPBP6O43824 516 aaPredicted RBP27.54■■■□□ 2
TTC3-224ENST00000494243 LPXNO60711 386 aa27.54■■■□□ 2
TTC3-224ENST00000494243 LGR5O75473 907 aa27.54■■■□□ 2
TTC3-224ENST00000494243 GJB5O95377 273 aa27.54■■■□□ 2
TTC3-224ENST00000494243 THPOP40225 353 aa27.54■■■□□ 2
TTC3-224ENST00000494243 GRB10Q13322 594 aa27.54■■■□□ 2
TTC3-224ENST00000494243 MKRN4PQ13434 485 aaPredicted RBP27.54■■■□□ 2
TTC3-224ENST00000494243 NECTIN1Q15223 517 aa27.54■■■□□ 2
TTC3-224ENST00000494243 ADAMTS19Q8TE59 1207 aa27.54■■■□□ 2
TTC3-224ENST00000494243 ATP6V0A1Q93050 837 aa27.54■■■□□ 2
TTC3-224ENST00000494243 NOP56O00567 594 aaKnown RBP27.53■■■□□ 2
TTC3-224ENST00000494243 TREHO43280 583 aa27.53■■■□□ 2
TTC3-224ENST00000494243 EFCAB14O75071 495 aa27.53■■■□□ 2
TTC3-224ENST00000494243 RXRAP19793 462 aa27.53■■■□□ 2
TTC3-224ENST00000494243 LIFRP42702 1097 aa27.53■■■□□ 2
TTC3-224ENST00000494243 GNAQP50148 359 aa27.53■■■□□ 2
TTC3-224ENST00000494243 TFF2Q03403 129 aa27.53■■■□□ 2
TTC3-224ENST00000494243 XRRA1Q6P2D8 792 aa27.53■■■□□ 2
TTC3-224ENST00000494243 NFXL1Q6ZNB6 911 aa27.53■■■□□ 2
TTC3-224ENST00000494243 CUL5Q93034 780 aa27.53■■■□□ 2
TTC3-224ENST00000494243 RAD9AQ99638 391 aa27.53■■■□□ 2
TTC3-224ENST00000494243 SEC63Q9UGP8 760 aaKnown RBP27.53■■■□□ 2
TTC3-224ENST00000494243 DOCK5Q9H7D0 1870 aa27.53■■■□□ 2
TTC3-224ENST00000494243 EMSYQ7Z589 1322 aa27.52■■■□□ 2
TTC3-224ENST00000494243 CCDC69A6NI79 296 aa27.52■■■□□ 2
TTC3-224ENST00000494243 RSPH10B2B2RC85 870 aa27.52■■■□□ 2
TTC3-224ENST00000494243 RSPH10BP0C881 870 aa27.52■■■□□ 2
TTC3-224ENST00000494243 CREB3L3Q68CJ9 461 aa27.52■■■□□ 2
TTC3-224ENST00000494243 DBF4BQ8NFT6 615 aa27.52■■■□□ 2
TTC3-224ENST00000494243 SENP7Q9BQF6 1050 aa27.52■■■□□ 2
TTC3-224ENST00000494243 BMP1P13497 986 aa27.51■■□□□ 1.99
TTC3-224ENST00000494243 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.51■■□□□ 1.994e-10■■■■■ 31.1
TTC3-224ENST00000494243 TRIM50Q86XT4 487 aa27.51■■□□□ 1.99
TTC3-224ENST00000494243 OSBPL7Q9BZF2 842 aa27.51■■□□□ 1.99
TTC3-224ENST00000494243 SETD4Q9NVD3 440 aa27.51■■□□□ 1.99
TTC3-224ENST00000494243 SKIV2LQ15477 1246 aaKnown RBP27.5■■□□□ 1.99
TTC3-224ENST00000494243 PLEKHG4Q58EX7 1191 aa27.5■■□□□ 1.99
TTC3-224ENST00000494243 RAB11FIP4Q86YS3 637 aa27.5■■□□□ 1.99
TTC3-224ENST00000494243 PSTPIP2Q9H939 334 aa27.5■■□□□ 1.99
TTC3-224ENST00000494243 hCG_1642624A0A1W2PR95 340 aa27.49■■□□□ 1.99
TTC3-224ENST00000494243 CALM1P0DP23 149 aa27.49■■□□□ 1.99
TTC3-224ENST00000494243 CALM2P0DP24 149 aa27.49■■□□□ 1.99
TTC3-224ENST00000494243 CALM3P0DP25 149 aa27.49■■□□□ 1.99
TTC3-224ENST00000494243 ADAM17P78536 824 aa27.49■■□□□ 1.99
TTC3-224ENST00000494243 UHRF1Q96T88 793 aaPredicted RBP27.49■■□□□ 1.99
TTC3-224ENST00000494243 LRRC2Q9BYS8 371 aa27.49■■□□□ 1.99
TTC3-224ENST00000494243 MUC3AQ02505 3323 aa27.49■■□□□ 1.99
TTC3-224ENST00000494243 LINC01553A4QN01 128 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 ATP9AO75110 1047 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 ERVK-21P61565 698 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 FAM117BQ6P1L5 589 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 NLRX1Q86UT6 975 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 FANCBQ8NB91 859 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 SUGCTQ9HAC7 445 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 SLC12A7Q9Y666 1083 aa27.48■■□□□ 1.99
TTC3-224ENST00000494243 COL4A4P53420 1690 aaPredicted RBP27.48■■□□□ 1.99
TTC3-224ENST00000494243 CAND2O75155 1236 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 ITGB5P18084 799 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 KCNQ1P51787 676 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 SP4Q02446 784 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 UTP14CQ5TAP6 766 aaKnown RBP27.47■■□□□ 1.99
TTC3-224ENST00000494243 TMTC3Q6ZXV5 915 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 CCDC82Q8N4S0 544 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 GPRASP2Q96D09 838 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 ANO2Q9NQ90 1003 aa27.47■■□□□ 1.99
TTC3-224ENST00000494243 GNAT1P11488 350 aa27.46■■□□□ 1.99
TTC3-224ENST00000494243 KCNA2P16389 499 aa27.46■■□□□ 1.99
TTC3-224ENST00000494243 SGMS1Q86VZ5 419 aa27.46■■□□□ 1.99
TTC3-224ENST00000494243 SKAP1Q86WV1 359 aa27.46■■□□□ 1.99
TTC3-224ENST00000494243 GIMAP8Q8ND71 665 aaPredicted RBP27.46■■□□□ 1.99
TTC3-224ENST00000494243 IL27Q8NEV9 243 aa27.46■■□□□ 1.99
TTC3-224ENST00000494243 GDPD5Q8WTR4 605 aa27.46■■□□□ 1.99
TTC3-224ENST00000494243 TGS1Q96RS0 853 aaKnown RBP27.46■■□□□ 1.99
TTC3-224ENST00000494243 ZNF215Q9UL58 517 aaPredicted RBP27.46■■□□□ 1.99
TTC3-224ENST00000494243 CTSHP09668 335 aa27.45■■□□□ 1.98
TTC3-224ENST00000494243 UBE2SQ16763 222 aa27.45■■□□□ 1.98
TTC3-224ENST00000494243 AAK1Q2M2I8 961 aa27.45■■□□□ 1.98
TTC3-224ENST00000494243 LMBR1Q8WVP7 490 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms