RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 CCDC57Q2TAC2 916 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 TCP11X2Q5H9J9 407 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 MAATS1Q7Z4T9 603 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 CPLX4Q7Z7G2 160 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 MB21D2Q8IYB1 491 aaPredicted RBP7.77□□□□□ -1.17
EPHA3-203ENST00000494014 CCDC197Q8NCU1 140 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 NCOA7Q8NI08 942 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 PIK3R5Q8WYR1 880 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 DTNBP1Q96EV8 351 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 KAZALD1Q96I82 304 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 ZNF570Q96NI8 536 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 VPS16Q9H269 839 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 RWDD2AQ9UIY3 292 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 SLC12A4Q9UP95 1085 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 RPS6KL1Q9Y6S9 549 aa7.77□□□□□ -1.17
EPHA3-203ENST00000494014 STK36Q9NRP7 1315 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 TTC26A0AVF1 554 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 STXBP3O00186 592 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 ECE2O60344 883 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 PPFIA2O75334 1257 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CSF1RP07333 972 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 SLC10A3P09131 477 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 LINGO3P0C6S8 592 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CDC25AP30304 524 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 KIF5BP33176 963 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CCNG1P51959 295 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 PPP2R2AP63151 447 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CDK17Q00537 523 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 SLC7A5Q01650 507 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 LAMB3Q13751 1172 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 BYSLQ13895 437 aaKnown RBP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 ITIH4Q14624 930 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 SAFBQ15424 915 aaKnown RBP eCLIP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 RSBN1LQ6PCB5 846 aaPredicted RBP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 MTHFD1LQ6UB35 978 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 SH3RF1Q7Z6J0 888 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 RALYLQ86SE5 291 aaKnown RBP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 NOSTRINQ8IVI9 506 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 WASF1Q92558 559 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CNOT10Q9H9A5 744 aaKnown RBP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CNOT7Q9UIV1 285 aaKnown RBP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 KCNJ18B7U540 433 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 ORC4O43929 436 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 UBXN1Q04323 297 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 KCNJ12Q14500 433 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 QPCTQ16769 361 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 GALNT15Q8N3T1 639 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CELF1Q92879 486 aaKnown RBP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CENPTQ96BT3 561 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 LRRC45Q96CN5 670 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 IQCDQ96DY2 449 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 TAB2Q9NYJ8 693 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.76□□□□□ -1.17
EPHA3-203ENST00000494014 CTNND2Q9UQB3 1225 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 PLAAQ9Y263 795 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 PPP2R3BQ9Y5P8 575 aa7.76□□□□□ -1.17
EPHA3-203ENST00000494014 POLR2AP24928 1970 aaKnown RBP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 HPDP32754 393 aaPredicted RBP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 MAGEA8P43361 318 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 METAP2P50579 478 aaKnown RBP eCLIP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 CTSWP56202 376 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 SNX1Q13596 522 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 SPA17Q15506 151 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 CFAP221Q4G0U5 840 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 WDR59Q6PJI9 974 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 GRAMD1CQ8IYS0 662 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 MB21D1Q8N884 522 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 TRPM4Q8TD43 1214 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 EZH1Q92800 747 aaPredicted RBP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 LACRTQ9GZZ8 138 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 ANKIB1Q9P2G1 1089 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 GGA1Q9UJY5 639 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 NFU1Q9UMS0 254 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 CLEC11AQ9Y240 323 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 GJA3Q9Y6H8 435 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 MAST3O60307 1309 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 MYH10P35580 1976 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 MYH7P12883 1935 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 LRRD1A4D1F6 860 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 LGALS16A8MUM7 142 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 B4DLN1 442 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 PDLIM1O00151 329 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 HEXIM1O94992 359 aaKnown RBP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 NPTXRO95502 500 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 CLTAP09496 248 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 ATP4AP20648 1035 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 CNGA1P29973 690 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 RBM5P52756 815 aaKnown RBP eCLIP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 MRPS35P82673 323 aaKnown RBP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 DPYDQ12882 1025 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 PAK1Q13153 545 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 MICALL2Q8IY33 904 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 AGAP11Q8TF27 550 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 RAPGEF5Q92565 580 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 COA1Q9GZY4 146 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 GPHNQ9NQX3 736 aaPredicted RBP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 PAG1Q9NWQ8 432 aa7.75□□□□□ -1.17
EPHA3-203ENST00000494014 AATFQ9NY61 560 aaKnown RBP eCLIP7.75□□□□□ -1.17
EPHA3-203ENST00000494014 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms