RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TRIM50Q86XT4 487 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 GPR20Q99678 358 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 RBM28Q9NW13 759 aaKnown RBP14.5□□□□□ -0.09
HSPG2-212ENST00000493940 NAP1L2Q9ULW6 460 aaPredicted RBP14.5□□□□□ -0.09
HSPG2-212ENST00000493940 UBIAD1Q9Y5Z9 338 aa14.5□□□□□ -0.09
HSPG2-212ENST00000493940 TRANK1O15050 2925 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.49□□□□□ -0.09
HSPG2-212ENST00000493940 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.49□□□□□ -0.09
HSPG2-212ENST00000493940 HMGB1P09429 215 aaKnown RBP14.49□□□□□ -0.09
HSPG2-212ENST00000493940 SUPT20HL2P0C7V6 817 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 KCNA2P16389 499 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 CLK2P49760 499 aaKnown RBP14.49□□□□□ -0.09
HSPG2-212ENST00000493940 KCNV1Q6PIU1 500 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 FBXL16Q8N461 479 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 MAFAQ8NHW3 353 aaPredicted RBP14.49□□□□□ -0.09
HSPG2-212ENST00000493940 CUL5Q93034 780 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 PBX4Q9BYU1 374 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 MLXIPQ9HAP2 919 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 NCOA5Q9HCD5 579 aaKnown RBP14.49□□□□□ -0.09
HSPG2-212ENST00000493940 ZSWIM6Q9HCJ5 1215 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 RIC8AQ9NPQ8 531 aa14.49□□□□□ -0.09
HSPG2-212ENST00000493940 NID2Q14112 1375 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 GSTTP1A0A1W2PQM5 241 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 FIBPO43427 364 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 EDIL3O43854 480 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 LGALS2P05162 132 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 MYOGP15173 224 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 DNAJB2P25686 324 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 PDIA3P30101 505 aaKnown RBP14.48□□□□□ -0.09
HSPG2-212ENST00000493940 METAP2P50579 478 aaKnown RBP eCLIP14.48□□□□□ -0.099e-8■■□□□ 12.7
HSPG2-212ENST00000493940 RABGGTBP53611 331 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 NAPAP54920 295 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 CCT2P78371 535 aaKnown RBP14.48□□□□□ -0.09
HSPG2-212ENST00000493940 SP4Q02446 784 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 MBTPS1Q14703 1052 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 GRIN2CQ14957 1233 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 PHKBQ93100 1093 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 BARHL2Q9NY43 387 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 PKD2L1Q9P0L9 805 aa14.48□□□□□ -0.09
HSPG2-212ENST00000493940 YBX2Q9Y2T7 364 aaKnown RBP14.48□□□□□ -0.09
HSPG2-212ENST00000493940 SMCO2A6NFE2 343 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 H3BRB1 525 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 NBNO60934 754 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 STAM2O75886 525 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 REC8O95072 547 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 ARP10275 920 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 CKBP12277 381 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 HOXC8P31273 242 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 EVCP57679 992 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 PFKFB3Q16875 520 aaPredicted RBP14.47□□□□□ -0.09
HSPG2-212ENST00000493940 PSRC1Q6PGN9 363 aaPredicted RBP14.47□□□□□ -0.09
HSPG2-212ENST00000493940 METTL7BQ6UX53 244 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 RUFY3Q7L099 469 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 C7orf31Q8N865 590 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 MYLIPQ8WY64 445 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 UIMC1Q96RL1 719 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 UPF3BQ9BZI7 483 aaKnown RBP14.47□□□□□ -0.09
HSPG2-212ENST00000493940 RNPEPQ9H4A4 650 aa14.47□□□□□ -0.09
HSPG2-212ENST00000493940 TUT1Q9H6E5 874 aaKnown RBP14.47□□□□□ -0.09
HSPG2-212ENST00000493940 TMEM265A0A087WTH1 108 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 TREHO43280 583 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 ARHGEF15O94989 841 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 SEC24BO95487 1268 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 RCAN1P53805 252 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 NEDD9Q14511 834 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 GNPTABQ3T906 1256 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 ZNF618Q5T7W0 954 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 UTP14CQ5TAP6 766 aaKnown RBP14.46□□□□□ -0.09
HSPG2-212ENST00000493940 XRRA1Q6P2D8 792 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 TMCO2Q7Z6W1 182 aaPredicted RBP14.46□□□□□ -0.09
HSPG2-212ENST00000493940 GPRASP2Q96D09 838 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 PCYT2Q99447 389 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 SENP7Q9BQF6 1050 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 JADE2Q9NQC1 790 aa14.46□□□□□ -0.09
HSPG2-212ENST00000493940 PRPF3O43395 683 aaKnown RBP14.45□□□□□ -0.1
HSPG2-212ENST00000493940 SMIM10L2AP0DMW4 78 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 SMIM10L2BP0DMW5 78 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 SCG2P13521 617 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 ADAM17P78536 824 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 FGD1P98174 961 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 RBL2Q08999 1139 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 JAKMIP3Q5VZ66 844 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 RPUSD2Q8IZ73 545 aaKnown RBP14.45□□□□□ -0.1
HSPG2-212ENST00000493940 CRYGNQ8WXF5 182 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 MXRA8Q9BRK3 442 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 ZNF576Q9H609 170 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 SETD4Q9NVD3 440 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 NOD1Q9Y239 953 aa14.45□□□□□ -0.1
HSPG2-212ENST00000493940 PRRC2BQ5JSZ5 2229 aaKnown RBP14.44□□□□□ -0.1
HSPG2-212ENST00000493940 SPDYE3A6NKU9 549 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 TCF7P36402 384 aaPredicted RBP14.44□□□□□ -0.1
HSPG2-212ENST00000493940 ADCY7P51828 1080 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 PTK7Q13308 1070 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 ITGB3BPQ13352 177 aaPredicted RBP14.44□□□□□ -0.1
HSPG2-212ENST00000493940 BFSP2Q13515 415 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 LRRC8DQ7L1W4 858 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 SPRED2Q7Z698 418 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 NLRX1Q86UT6 975 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 SERINC5Q86VE9 423 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms