RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-234ENST00000493923 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
HDAC6-234ENST00000493923 RIOX1Q9H6W3 641 aa9.38□□□□□ -0.91
HDAC6-234ENST00000493923 PXMP2Q9NR77 195 aa9.38□□□□□ -0.91
HDAC6-234ENST00000493923 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
HDAC6-234ENST00000493923 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
HDAC6-234ENST00000493923 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
HDAC6-234ENST00000493923 BDP1A6H8Y1 2624 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 CLGNO14967 610 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 ZBTB5O15062 677 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 SEC24BO95487 1268 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 FGBP02675 491 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 ZNF286BP0CG31 522 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 FOSL2P15408 326 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 CPT1AP50416 773 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-234ENST00000493923 SEMA3FQ13275 785 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 ARHGEF16Q5VV41 709 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-234ENST00000493923 PSRC1Q6PGN9 363 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-234ENST00000493923 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC6-234ENST00000493923 NSUN6Q8TEA1 469 aaKnown RBP9.37□□□□□ -0.91
HDAC6-234ENST00000493923 ZNF830Q96NB3 372 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-234ENST00000493923 PDCD2LQ9BRP1 358 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 AMNQ9BXJ7 453 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 LRRC2Q9BYS8 371 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 PRDM12Q9H4Q4 367 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 LY9Q9HBG7 655 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 PCDHA1Q9Y5I3 950 aa9.37□□□□□ -0.91
HDAC6-234ENST00000493923 hCG_1642624A0A1W2PR95 340 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 SLC27A2O14975 620 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 NKRFO15226 690 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC6-234ENST00000493923 PLEKHA8P1O95397 391 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 GH1P01241 217 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 MYCLP12524 364 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-234ENST00000493923 RXRAP19793 462 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 NT5C2P49902 561 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 CBX1P83916 185 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 WTAPQ15007 396 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 PGM5Q15124 567 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 STXBP2Q15833 593 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 TMEM67Q5HYA8 995 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 TMCO2Q7Z6W1 182 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-234ENST00000493923 FCHSD1Q86WN1 690 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
HDAC6-234ENST00000493923 ESYT1Q9BSJ8 1104 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 OSBPL7Q9BZF2 842 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-234ENST00000493923 CGNQ9P2M7 1197 aaKnown RBP9.36□□□□□ -0.91
HDAC6-234ENST00000493923 HDAC6Q9UBN7 1215 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 PNMA2Q9UL42 364 aa9.36□□□□□ -0.91
HDAC6-234ENST00000493923 TMEM265A0A087WTH1 108 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 EPOPA6NHQ4 379 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 RFXAPO00287 272 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 SH2B2O14492 632 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 EIF3JO75822 258 aaKnown RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 MBD3O95983 291 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 PTMAP06454 111 aaKnown RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 UBA1P22314 1058 aaKnown RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 PSEN2P49810 448 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 MRPS9P82933 396 aaKnown RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 TRIM71Q2Q1W2 868 aaKnown RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 UVSSAQ2YD98 709 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 HSDL1Q3SXM5 330 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 NFRKBQ6P4R8 1299 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 MAMSTRQ6ZN01 415 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 VSIG10LQ86VR7 867 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 MCF2L2Q86YR7 1114 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 SRBD1Q8N5C6 995 aaKnown RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 FAM184AQ8NB25 1140 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 NCOA7Q8NI08 942 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 RUFY2Q8WXA3 655 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 IWS1Q96ST2 819 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.35□□□□□ -0.91
HDAC6-234ENST00000493923 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
HDAC6-234ENST00000493923 MUC3AQ02505 3323 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 PNMA6FA0A0J9YX94 578 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 HAS3O00219 553 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 PRC1O43663 620 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 GGPS1O95749 300 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 IQCF3P0C7M6 154 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-234ENST00000493923 TRDNQ13061 729 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 MBTPS1Q14703 1052 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 NECTIN1Q15223 517 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 PTGISQ16647 500 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 CREB3L3Q68CJ9 461 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 USP17L6PQ6QN14 398 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 RALYLQ86SE5 291 aaKnown RBP9.34□□□□□ -0.91
HDAC6-234ENST00000493923 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 PPM1EQ8WY54 764 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 ANKRD7Q92527 254 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-234ENST00000493923 TCEANC2Q96MN5 208 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
HDAC6-234ENST00000493923 FRMPD4Q14CM0 1322 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms