RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CHMP4BP1P59074 171 aa25.86■■□□□ 1.73
SNIP1-203ENST00000493916 STK3Q13188 491 aa25.86■■□□□ 1.73
SNIP1-203ENST00000493916 KIAA0753Q2KHM9 967 aa25.86■■□□□ 1.73
SNIP1-203ENST00000493916 REXO1Q8N1G1 1221 aaKnown RBP25.86■■□□□ 1.73
SNIP1-203ENST00000493916 MXRA8Q9BRK3 442 aa25.86■■□□□ 1.73
SNIP1-203ENST00000493916 C16orf70Q9BSU1 422 aa25.86■■□□□ 1.73
SNIP1-203ENST00000493916 TPCN1Q9ULQ1 816 aa25.86■■□□□ 1.73
SNIP1-203ENST00000493916 ATP9AO75110 1047 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 LGALS2P05162 132 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 CYP2C9P11712 490 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 C8orf34Q49A92 452 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 GPR153Q6NV75 609 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 C7orf31Q8N865 590 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 BICD2Q8TD16 824 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 LRCH3Q96II8 777 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 WNT8AQ9H1J5 351 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 GTF2IRD1Q9UHL9 959 aa25.85■■□□□ 1.73
SNIP1-203ENST00000493916 PFKFB2O60825 505 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 DEXIO95424 95 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 AK2P54819 239 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 ARHGAP4P98171 946 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 SCRN1Q12765 414 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 PTGISQ16647 500 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 CEP55Q53EZ4 464 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 JAKMIP3Q5VZ66 844 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 GDF6Q6KF10 455 aaPredicted RBP25.84■■□□□ 1.73
SNIP1-203ENST00000493916 FAM177A1Q8N128 213 aaPredicted RBP25.84■■□□□ 1.73
SNIP1-203ENST00000493916 CRYGNQ8WXF5 182 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 ALG1Q9BT22 464 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 SLKQ9H2G2 1235 aaPredicted RBP25.84■■□□□ 1.73
SNIP1-203ENST00000493916 VPS54Q9P1Q0 977 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 HDAC6Q9UBN7 1215 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 NOD1Q9Y239 953 aa25.84■■□□□ 1.73
SNIP1-203ENST00000493916 DOCK5Q9H7D0 1870 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 PITPNM1O00562 1244 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 ADAMTS3O15072 1205 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 CDKL5O76039 1030 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 NIPA1Q7RTP0 329 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 CTAGE1Q96RT6 745 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 IL23AQ9NPF7 189 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 KCNH7Q9NS40 1196 aa25.83■■□□□ 1.73
SNIP1-203ENST00000493916 H3BRB1 525 aa25.82■■□□□ 1.72
SNIP1-203ENST00000493916 CYP3A4P08684 503 aa25.82■■□□□ 1.72
SNIP1-203ENST00000493916 CCL23P55773 120 aa25.82■■□□□ 1.72
SNIP1-203ENST00000493916 PSRC1Q6PGN9 363 aaPredicted RBP25.82■■□□□ 1.72
SNIP1-203ENST00000493916 C16orf59Q7L2K0 433 aa25.82■■□□□ 1.72
SNIP1-203ENST00000493916 CYP2W1Q8TAV3 490 aa25.82■■□□□ 1.72
SNIP1-203ENST00000493916 RNPC3Q96LT9 517 aaKnown RBP25.82■■□□□ 1.72
SNIP1-203ENST00000493916 TUT1Q9H6E5 874 aaKnown RBP25.82■■□□□ 1.72
SNIP1-203ENST00000493916 MEIS1O00470 390 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 BFSP2Q13515 415 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 TMEM240Q5SV17 173 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 CCDC155Q8N6L0 562 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.81■■□□□ 1.72
SNIP1-203ENST00000493916 TELO2Q9Y4R8 837 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 NFASCO94856 1347 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 STK36Q9NRP7 1315 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 TANC1Q9C0D5 1861 aa25.81■■□□□ 1.72
SNIP1-203ENST00000493916 HOXC8P31273 242 aa25.8■■□□□ 1.72
SNIP1-203ENST00000493916 SP4Q02446 784 aa25.8■■□□□ 1.72
SNIP1-203ENST00000493916 CAGE1Q8TC20 777 aa25.8■■□□□ 1.72
SNIP1-203ENST00000493916 PKD2L1Q9P0L9 805 aa25.8■■□□□ 1.72
SNIP1-203ENST00000493916 ZNF215Q9UL58 517 aaPredicted RBP25.8■■□□□ 1.72
SNIP1-203ENST00000493916 ARP10275 920 aa25.79■■□□□ 1.72
SNIP1-203ENST00000493916 NEK4P51957 841 aa25.79■■□□□ 1.72
SNIP1-203ENST00000493916 NLRP5P59047 1200 aa25.79■■□□□ 1.72
SNIP1-203ENST00000493916 RBL2Q08999 1139 aa25.79■■□□□ 1.72
SNIP1-203ENST00000493916 SEPT1Q8WYJ6 367 aa25.79■■□□□ 1.72
SNIP1-203ENST00000493916 AGO4Q9HCK5 861 aaKnown RBP25.79■■□□□ 1.72
SNIP1-203ENST00000493916 JPH1Q9HDC5 661 aaPredicted RBP25.79■■□□□ 1.72
SNIP1-203ENST00000493916 FAM86B1E9PN63 330 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 FAM86B2P0C5J1 330 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 ACRP10323 421 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 RFC2P35250 354 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 TCF7P36402 384 aaPredicted RBP25.78■■□□□ 1.72
SNIP1-203ENST00000493916 ZNF76P36508 570 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 PTK7Q13308 1070 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 RASIP1Q5U651 963 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 TRIM50Q86XT4 487 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 RPUSD2Q8IZ73 545 aaKnown RBP25.78■■□□□ 1.72
SNIP1-203ENST00000493916 RETREG2Q8NC44 543 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 RASGRP4Q8TDF6 673 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 DHX38Q92620 1227 aaKnown RBP25.78■■□□□ 1.72
SNIP1-203ENST00000493916 SCLYQ96I15 445 aa25.78■■□□□ 1.72
SNIP1-203ENST00000493916 IGLV3-22A0A075B6J6 115 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 GSTTP1A0A1W2PQM5 241 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 PFKMP08237 780 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 SMIM10L2AP0DMW4 78 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 SMIM10L2BP0DMW5 78 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 SMAD3P84022 425 aaKnown RBP25.77■■□□□ 1.72
SNIP1-203ENST00000493916 ITGB3BPQ13352 177 aaPredicted RBP25.77■■□□□ 1.72
SNIP1-203ENST00000493916 GALNT17Q6IS24 598 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 ZNF365Q70YC5 407 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 DAGLBQ8NCG7 672 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 AFAP1L1Q8TED9 768 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 VWCEQ96DN2 955 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 SDF4Q9BRK5 362 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 SLC9A2Q9UBY0 812 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 PCDHA4Q9UN74 947 aa25.77■■□□□ 1.72
SNIP1-203ENST00000493916 IQCF3P0C7M6 154 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms