RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 C7orf31Q8N865 590 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 MXRA8Q9BRK3 442 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 ALG1Q9BT22 464 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 TMEM260Q9NX78 707 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 TBX21Q9UL17 535 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 TPCN1Q9ULQ1 816 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 NOD1Q9Y239 953 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 H3BRB1 525 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 ATP9AO75110 1047 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 HOXD8P13378 290 aaPredicted RBP7.96□□□□□ -1.14
TOP3A-207ENST00000493648 ITGB8P26012 769 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 SREBF1P36956 1147 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 ARHGAP4P98171 946 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 PPIGQ13427 754 aaKnown RBP eCLIP7.96□□□□□ -1.146e-7■■■■■ 27
TOP3A-207ENST00000493648 MFSD10Q14728 455 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 PTGISQ16647 500 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 LRIT3Q3SXY7 679 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 CEP55Q53EZ4 464 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 GALNT17Q6IS24 598 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 SESTD1Q86VW0 696 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 RETREG2Q8NC44 543 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 SEPT1Q8WYJ6 367 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 WASF1Q92558 559 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 KAT2BQ92831 832 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 PGBD1Q96JS3 809 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 SDF4Q9BRK5 362 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 C22orf23Q9BZE7 217 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 PPP1R12CQ9BZL4 782 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 HIPK3Q9H422 1215 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 TUT1Q9H6E5 874 aaKnown RBP7.96□□□□□ -1.14
TOP3A-207ENST00000493648 UPF2Q9HAU5 1272 aaKnown RBP7.96□□□□□ -1.14
TOP3A-207ENST00000493648 TRMT13Q9NUP7 481 aaKnown RBP7.96□□□□□ -1.14
TOP3A-207ENST00000493648 VPS54Q9P1Q0 977 aa7.96□□□□□ -1.14
TOP3A-207ENST00000493648 SCN10AQ9Y5Y9 1956 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 HAS3O00219 553 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 MEIS1O00470 390 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 F2P00734 622 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 CYP3A4P08684 503 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 ZNF286BP0CG31 522 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 CYP2C9P11712 490 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 KCNA2P16389 499 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 CYP2C18P33260 490 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 SP4Q02446 784 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 BFSP2Q13515 415 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 SHHQ15465 462 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 ME3Q16798 604 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 KIAA0753Q2KHM9 967 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 NIPA1Q7RTP0 329 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 PLA2G4DQ86XP0 818 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 RPUSD2Q8IZ73 545 aaKnown RBP7.95□□□□□ -1.14
TOP3A-207ENST00000493648 CCDC155Q8N6L0 562 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 GPR20Q99678 358 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 C16orf70Q9BSU1 422 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 NOC4LQ9BVI4 516 aaKnown RBP7.95□□□□□ -1.14
TOP3A-207ENST00000493648 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 KCNH7Q9NS40 1196 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 PKD2L1Q9P0L9 805 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 PCDH10Q9P2E7 1040 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 HDAC6Q9UBN7 1215 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 GTF2IRD1Q9UHL9 959 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 ZNF215Q9UL58 517 aaPredicted RBP7.95□□□□□ -1.14
TOP3A-207ENST00000493648 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
TOP3A-207ENST00000493648 LTBP2Q14767 1821 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 C17orf102A2RUQ5 167 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 FGBP02675 491 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 LGALS2P05162 132 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 ARP10275 920 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 GNAT1P11488 350 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 CSF2RAP15509 400 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 TCF7P36402 384 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 RBM25P49756 843 aaKnown RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 FXR1P51114 621 aaKnown RBP eCLIP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 USP11P51784 963 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 CCL23P55773 120 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 UTP14CQ5TAP6 766 aaKnown RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 BLIDQ8IZY5 108 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 NECAB1Q8N987 351 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 IL27Q8NEV9 243 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 CYP2W1Q8TAV3 490 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 PPP1R13LQ8WUF5 828 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 TNPO1Q92973 898 aaKnown RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 GTF3C6Q969F1 213 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 ZSCAN31Q96LW9 406 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 AGO4Q9HCK5 861 aaKnown RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 JPH1Q9HDC5 661 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 IL23AQ9NPF7 189 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 ORC3Q9UBD5 711 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-207ENST00000493648 SLC9A2Q9UBY0 812 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 LIMCH1Q9UPQ0 1083 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 NFASCO94856 1347 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 STK36Q9NRP7 1315 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 DNAH12Q6ZR08 3092 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 DOCK5Q9H7D0 1870 aa7.94□□□□□ -1.14
TOP3A-207ENST00000493648 GSTTP1A0A1W2PQM5 241 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 FAM86B1E9PN63 330 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 ADAMTS3O15072 1205 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 CTDNEP1O95476 244 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 FAM86B2P0C5J1 330 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms