RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 UTP14CQ5TAP6 766 aaKnown RBP16.86■□□□□ 0.29
ATG4B-223ENST00000493618 RNF20Q5VTR2 975 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 PCNX4Q63HM2 1172 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 SLC9A7Q96T83 725 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 PSTPIP2Q9H939 334 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 SIP14410 1827 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 H3BRB1 525 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 RFXAPO00287 272 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 FIBPO43427 364 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 STAM2O75886 525 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 NEDD9Q14511 834 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 SYNE3Q6ZMZ3 975 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 SGMS1Q86VZ5 419 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 TRIM50Q86XT4 487 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 HERC6Q8IVU3 1022 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 GPR20Q99678 358 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 TUT1Q9H6E5 874 aaKnown RBP16.85■□□□□ 0.29
ATG4B-223ENST00000493618 PKD2L1Q9P0L9 805 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 BRPF3Q9ULD4 1205 aa16.85■□□□□ 0.29
ATG4B-223ENST00000493618 C17orf102A2RUQ5 167 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 SMIM10L2AP0DMW4 78 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 SMIM10L2BP0DMW5 78 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 KCNJ6P48051 423 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
ATG4B-223ENST00000493618 DEFB103AP81534 67 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 EXOSC10Q01780 885 aaKnown RBP16.84■□□□□ 0.29
ATG4B-223ENST00000493618 RBL2Q08999 1139 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 TRAF7Q6Q0C0 670 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 METTL7BQ6UX53 244 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 CNTNAP5Q8WYK1 1306 aa16.84■□□□□ 0.29
ATG4B-223ENST00000493618 TREHO43280 583 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 CPA1P15085 419 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 THPOP40225 353 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 MBTPS1Q14703 1052 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 WWC2Q6AWC2 1192 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 CNKSR3Q6P9H4 555 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 DHX32Q7L7V1 743 aaKnown RBP16.83■□□□□ 0.28
ATG4B-223ENST00000493618 NLRX1Q86UT6 975 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 PHOSPHO2Q8TCD6 241 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 ATP6V0A1Q93050 837 aa16.83■□□□□ 0.28
ATG4B-223ENST00000493618 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-223ENST00000493618 LOXHD1Q8IVV2 1947 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 TRANK1O15050 2925 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 EPOPA6NHQ4 379 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 ZBTB43O43298 467 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 ATP9AO75110 1047 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 CXCL10P02778 98 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 RTN1Q16799 776 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 SPRED2Q7Z698 418 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 SERINC5Q86VE9 423 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 PGBD1Q96JS3 809 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 RNPEPQ9H4A4 650 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 PCDHA6Q9UN73 950 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 PCDHA8Q9Y5H6 950 aa16.82■□□□□ 0.28
ATG4B-223ENST00000493618 KLF18A0A0U1RQI7 1052 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 LCHNA4D1U4 455 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 SPDYE3A6NKU9 549 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 GOLGA8AA7E2F4 631 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 GOLGA8BA8MQT2 603 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 TLL1O43897 1013 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 ITGB5P18084 799 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 TAP1Q03518 808 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 TYW1BQ6NUM6 668 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 FAM117BQ6P1L5 589 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 XRRA1Q6P2D8 792 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 ARNTL2Q8WYA1 636 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 ZBED2Q9BTP6 218 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 USP26Q9BXU7 913 aa16.81■□□□□ 0.28
ATG4B-223ENST00000493618 RBM28Q9NW13 759 aaKnown RBP16.81■□□□□ 0.28
ATG4B-223ENST00000493618 VCANP13611 3396 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 RSPH10B2B2RC85 870 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
ATG4B-223ENST00000493618 CTSHP09668 335 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 RSPH10BP0C881 870 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 KCNA2P16389 499 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 NAPAP54920 295 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 GPRASP2Q96D09 838 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 SENP7Q9BQF6 1050 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 OSBPL7Q9BZF2 842 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 UBIAD1Q9Y5Z9 338 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 V9GY48 417 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-223ENST00000493618 NLRC5Q86WI3 1866 aa16.8■□□□□ 0.28
ATG4B-223ENST00000493618 TCF20Q9UGU0 1960 aaKnown RBP16.79■□□□□ 0.28
ATG4B-223ENST00000493618 LGR5O75473 907 aa16.79■□□□□ 0.28
ATG4B-223ENST00000493618 MARK3P27448 753 aa16.79■□□□□ 0.28
ATG4B-223ENST00000493618 CDC27P30260 824 aa16.79■□□□□ 0.28
ATG4B-223ENST00000493618 HOXC8P31273 242 aa16.79■□□□□ 0.28
ATG4B-223ENST00000493618 TCF7P36402 384 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-223ENST00000493618 ARHGAP4P98171 946 aa16.79■□□□□ 0.28
ATG4B-223ENST00000493618 FGD1P98174 961 aa16.79■□□□□ 0.28
ATG4B-223ENST00000493618 APOBRQ0VD83 1088 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms