RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 ADH1CP00326 375 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 TSPY3P0CV98 308 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 TSPY8P0CW00 308 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 ACRP10323 421 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 GRM5P41594 1212 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 SLC1A4P43007 532 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 ALDH5A1P51649 535 aaPredicted RBP8.29□□□□□ -1.08
CAB39-206ENST00000493540 GHRHRQ02643 423 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 PDE4BQ07343 736 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 NR5A1Q13285 461 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 IQSEC1Q6DN90 963 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 FBXO16Q8IX29 292 aaPredicted RBP8.29□□□□□ -1.08
CAB39-206ENST00000493540 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 DCAF4Q8WV16 495 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 CCDC97Q96F63 343 aaPredicted RBP8.29□□□□□ -1.08
CAB39-206ENST00000493540 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 PPP1R12CQ9BZL4 782 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 PRDM12Q9H4Q4 367 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 SPC25Q9HBM1 224 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 PDGFCQ9NRA1 345 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 HOMER2Q9NSB8 354 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 TCP11L1Q9NUJ3 509 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 TOR4AQ9NXH8 423 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 DDX49Q9Y6V7 483 aaKnown RBP8.29□□□□□ -1.08
CAB39-206ENST00000493540 CACNA1HO95180 2353 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 TECTAO75443 2155 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 NFIBO00712 420 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 TFAP4Q01664 338 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 VPS53Q5VIR6 699 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 NFRKBQ6P4R8 1299 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 SLC30A10Q6XR72 485 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 SESTD1Q86VW0 696 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 ZNF444Q8N0Y2 327 aaPredicted RBP8.28□□□□□ -1.08
CAB39-206ENST00000493540 TRERF1Q96PN7 1200 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 GAS2L1Q99501 681 aaPredicted RBP8.28□□□□□ -1.08
CAB39-206ENST00000493540 NACAP1Q9BZK3 213 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 NAPBQ9H115 298 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 TRPV6Q9H1D0 765 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 WASF2Q9Y6W5 498 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 TNKSO95271 1327 aa8.28□□□□□ -1.08
CAB39-206ENST00000493540 ERC2O15083 957 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 ARHGEF15O94989 841 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 PDHBP11177 359 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.09
CAB39-206ENST00000493540 ALAS1P13196 640 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 HOXD8P13378 290 aaPredicted RBP8.27□□□□□ -1.09
CAB39-206ENST00000493540 BMP1P13497 986 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 MX1P20591 662 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 MCCP23508 829 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 RFC2P35250 354 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 PSMC6P62333 389 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 PTPN11Q06124 597 aaPredicted RBP8.27□□□□□ -1.09
CAB39-206ENST00000493540 GPNMBQ14956 572 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 LRRFIP1Q32MZ4 808 aaKnown RBP8.27□□□□□ -1.09
CAB39-206ENST00000493540 KCTD1Q719H9 257 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 RNF135Q8IUD6 432 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 DNERQ8NFT8 737 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 PURBQ96QR8 312 aaKnown RBP8.27□□□□□ -1.09
CAB39-206ENST00000493540 MTIF3Q9H2K0 278 aaKnown RBP8.27□□□□□ -1.09
CAB39-206ENST00000493540 NKX2-4Q9H2Z4 354 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 VPS13AQ96RL7 3174 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 ZDBF2Q9HCK1 2354 aa8.27□□□□□ -1.09
CAB39-206ENST00000493540 CFAP54Q96N23 3096 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 A0A0D9SFI3 127 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 EPOPA6NHQ4 379 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 J3QL48 77 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 NKRFO15226 690 aaKnown RBP eCLIP8.26□□□□□ -1.09
CAB39-206ENST00000493540 LPXNO60711 386 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 FGBP02675 491 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 FSHRP23945 695 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 HOXC8P31273 242 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 NT5C2P49902 561 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 MRPS5P82675 430 aaKnown RBP8.26□□□□□ -1.09
CAB39-206ENST00000493540 DHX9Q08211 1270 aaKnown RBP8.26□□□□□ -1.09
CAB39-206ENST00000493540 ZNF543Q08ER8 600 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 CCDC62Q6P9F0 684 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 STK11IPQ8N1F8 1099 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 RGS22Q8NE09 1264 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 SLC9A7Q96T83 725 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 TMEM47Q9BQJ4 181 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 TRMT13Q9NUP7 481 aaKnown RBP8.26□□□□□ -1.09
CAB39-206ENST00000493540 MSRAQ9UJ68 235 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 CCPG1Q9ULG6 757 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 MTCH2Q9Y6C9 303 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 DENND4AQ7Z401 1863 aa8.26□□□□□ -1.09
CAB39-206ENST00000493540 TSPY2A6NKD2 308 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 PIK3CDO00329 1044 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 DYNC1LI2O43237 492 aaPredicted RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 ZEB2O60315 1214 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 BAIAP3O94812 1187 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 ARIH2O95376 493 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 CXCL10P02778 98 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 SLC3A2P08195 630 aaKnown RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 TOP1P11387 765 aaKnown RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 SKIP12755 728 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 CPT1AP50416 773 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 CCL23P55773 120 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 RAB15P59190 212 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms