RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 CEP120Q8N960 986 aa10.6□□□□□ -0.71
CSTF1-206ENST00000493039 CLIC6Q96NY7 704 aa10.6□□□□□ -0.71
CSTF1-206ENST00000493039 ABHD16BQ9H3Z7 469 aa10.6□□□□□ -0.71
CSTF1-206ENST00000493039 DDX41Q9UJV9 622 aaKnown RBP10.6□□□□□ -0.71
CSTF1-206ENST00000493039 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
CSTF1-206ENST00000493039 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 TCHHQ07283 1943 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 LRRC37A2A6NM11 1700 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
CSTF1-206ENST00000493039 TTC36A6NLP5 189 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 IPO5O00410 1097 aaKnown RBP10.59□□□□□ -0.71
CSTF1-206ENST00000493039 SPTLC2O15270 562 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 ADCY3O60266 1144 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 LY6KQ17RY6 165 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
CSTF1-206ENST00000493039 EGFL6Q8IUX8 553 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 SPATA32Q96LK8 384 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 NAP1L4Q99733 375 aaKnown RBP10.59□□□□□ -0.71
CSTF1-206ENST00000493039 VTA1Q9NP79 307 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 PKD2L1Q9P0L9 805 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 VAV3Q9UKW4 847 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 PCDHA7Q9UN72 937 aa10.59□□□□□ -0.71
CSTF1-206ENST00000493039 B4DLN1 442 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 TBX3O15119 743 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 TXKP42681 527 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 CACNB2Q08289 660 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 STK38Q15208 465 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 MAP3K21Q5TCX8 1036 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 ARL6IP4Q66PJ3 421 aaKnown RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 PXYLP1Q8TE99 480 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 COPS5Q92905 334 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 FAM20AQ96MK3 541 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 ZNF577Q9BSK1 485 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 SCAND2PQ9GZW5 306 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 SRPRBQ9Y5M8 271 aaKnown RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 MKI67P46013 3256 aaKnown RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 LAD1O00515 517 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 PPP6R2O75170 966 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 GADD45BO75293 160 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 CCNE2O96020 404 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 TGFB3P10600 412 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 CYBAP13498 195 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 UBA1P22314 1058 aaKnown RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 CDC25AP30304 524 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 PRPHP41219 470 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 NLRX1Q86UT6 975 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 RAET1EQ8TD07 263 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 SENP7Q9BQF6 1050 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 TTC12Q9H892 705 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-206ENST00000493039 PTPN22Q9Y2R2 807 aa10.58□□□□□ -0.72
CSTF1-206ENST00000493039 MYH15Q9Y2K3 1946 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 VGLL3A8MV65 326 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 EML1O00423 815 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 SORBS3O60504 671 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 BMP15O95972 392 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 SMPD1P17405 629 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 TECP42680 631 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 PRMT2P55345 433 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 ARHGEF6Q15052 776 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 IGSF22Q8N9C0 903 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 KCNG4Q8TDN1 519 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 SCFD2Q8WU76 684 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 MPHOSPH6Q99547 160 aaKnown RBP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 RIT2Q99578 217 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 PCDHA12Q9UN75 941 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 CEP131Q9UPN4 1083 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 VWA3AA6NCI4 1184 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 POTEMA6NI47 508 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 PP2D1A8MPX8 630 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 TXNP10599 105 aaKnown RBP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 SHC4Q6S5L8 630 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 LENG1Q96BZ8 264 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 CSRNP2Q9H175 543 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 GNEQ9Y223 722 aaKnown RBP10.57□□□□□ -0.72
CSTF1-206ENST00000493039 ELP1O95163 1332 aa10.57□□□□□ -0.72
CSTF1-206ENST00000493039 PRPF40AO75400 957 aaKnown RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 FARP2O94887 1054 aaPredicted RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 PRKAR2AP13861 404 aaKnown RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 CCND3P30281 292 aaPredicted RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 GRK4P32298 578 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 ME1P48163 572 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 DUSP28Q4G0W2 176 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 LRCH2Q5VUJ6 765 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 MFSD14CQ5VZR4 134 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 IQSEC1Q6DN90 963 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 DTHD1Q6ZMT9 781 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms