RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 FANCBQ8NB91 859 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 SLC9A7Q96T83 725 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 GPR20Q99678 358 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 MUC3AQ02505 3323 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 CNTNAP5Q8WYK1 1306 aa21.26■□□□□ 0.99
CHD1L-209ENST00000492728 EPOPA6NHQ4 379 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 FIBPO43427 364 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 STAM2O75886 525 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 CALM1P0DP23 149 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 CALM2P0DP24 149 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 CALM3P0DP25 149 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 WDR5P61964 334 aaKnown RBP21.25■□□□□ 0.99
CHD1L-209ENST00000492728 DEFB103AP81534 67 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 EXOSC10Q01780 885 aaKnown RBP21.25■□□□□ 0.99
CHD1L-209ENST00000492728 APOA5Q6Q788 366 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 HERC6Q8IVU3 1022 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 PPM1EQ8WY54 764 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 BRPF3Q9ULD4 1205 aa21.25■□□□□ 0.99
CHD1L-209ENST00000492728 TTC28Q96AY4 2481 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 TRANK1O15050 2925 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 RFXAPO00287 272 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 BAIAP3O94812 1187 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 SMIM10L2AP0DMW4 78 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 SMIM10L2BP0DMW5 78 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 FUT2Q10981 343 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 TYW1BQ6NUM6 668 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 SERINC5Q86VE9 423 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 PHOSPHO2Q8TCD6 241 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 CUL5Q93034 780 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 NEK1Q96PY6 1258 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 OSBPL7Q9BZF2 842 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 PSTPIP2Q9H939 334 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 CERS4Q9HA82 394 aa21.24■□□□□ 0.99
CHD1L-209ENST00000492728 XIRP2A4UGR9 3374 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 H3BRB1 525 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 ATP9AO75110 1047 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 CDC45O75419 566 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 ITGB5P18084 799 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 IGFBP4P22692 258 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 SP4Q02446 784 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 NEDD9Q14511 834 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 WWC2Q6AWC2 1192 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 CNKSR3Q6P9H4 555 aa21.23■□□□□ 0.99
CHD1L-209ENST00000492728 TUT1Q9H6E5 874 aaKnown RBP21.23■□□□□ 0.99
CHD1L-209ENST00000492728 LCHNA4D1U4 455 aa21.22■□□□□ 0.99
CHD1L-209ENST00000492728 NOP56O00567 594 aaKnown RBP21.22■□□□□ 0.99
CHD1L-209ENST00000492728 TREHO43280 583 aa21.22■□□□□ 0.99
CHD1L-209ENST00000492728 KCNA2P16389 499 aa21.22■□□□□ 0.99
CHD1L-209ENST00000492728 TAP1Q03518 808 aa21.22■□□□□ 0.99
CHD1L-209ENST00000492728 CCDC85BQ15834 202 aaPredicted RBP21.22■□□□□ 0.99
CHD1L-209ENST00000492728 TSGA10IPQ3SY00 556 aa21.22■□□□□ 0.99
CHD1L-209ENST00000492728 HEATR3Q7Z4Q2 680 aa21.22■□□□□ 0.99
CHD1L-209ENST00000492728 RNPEPQ9H4A4 650 aa21.22■□□□□ 0.99
CHD1L-209ENST00000492728 C17orf102A2RUQ5 167 aa21.21■□□□□ 0.99
CHD1L-209ENST00000492728 CPA1P15085 419 aa21.21■□□□□ 0.99
CHD1L-209ENST00000492728 MKRN4PQ13434 485 aaPredicted RBP21.21■□□□□ 0.99
CHD1L-209ENST00000492728 UTP14CQ5TAP6 766 aaKnown RBP21.21■□□□□ 0.99
CHD1L-209ENST00000492728 RNF20Q5VTR2 975 aa21.21■□□□□ 0.99
CHD1L-209ENST00000492728 XRRA1Q6P2D8 792 aa21.21■□□□□ 0.99
CHD1L-209ENST00000492728 SENP7Q9BQF6 1050 aa21.21■□□□□ 0.99
CHD1L-209ENST00000492728 FAM217BQ9NTX9 383 aaPredicted RBP21.21■□□□□ 0.99
CHD1L-209ENST00000492728 UBIAD1Q9Y5Z9 338 aa21.21■□□□□ 0.99
CHD1L-209ENST00000492728 THPOP40225 353 aa21.2■□□□□ 0.98
CHD1L-209ENST00000492728 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
CHD1L-209ENST00000492728 ATP6V0A1Q93050 837 aa21.2■□□□□ 0.98
CHD1L-209ENST00000492728 GPRASP2Q96D09 838 aa21.2■□□□□ 0.98
CHD1L-209ENST00000492728 PGBD1Q96JS3 809 aa21.2■□□□□ 0.98
CHD1L-209ENST00000492728 SETD4Q9NVD3 440 aa21.2■□□□□ 0.98
CHD1L-209ENST00000492728 PCDHA6Q9UN73 950 aa21.2■□□□□ 0.98
CHD1L-209ENST00000492728 PCDHA8Q9Y5H6 950 aa21.2■□□□□ 0.98
CHD1L-209ENST00000492728 COL4A4P53420 1690 aaPredicted RBP21.2■□□□□ 0.98
CHD1L-209ENST00000492728 CDC27P30260 824 aa21.19■□□□□ 0.98
CHD1L-209ENST00000492728 KCNJ6P48051 423 aa21.19■□□□□ 0.98
CHD1L-209ENST00000492728 KRT40Q6A162 431 aa21.19■□□□□ 0.98
CHD1L-209ENST00000492728 NLRX1Q86UT6 975 aa21.19■□□□□ 0.98
CHD1L-209ENST00000492728 USP26Q9BXU7 913 aa21.19■□□□□ 0.98
CHD1L-209ENST00000492728 PKD2L1Q9P0L9 805 aa21.19■□□□□ 0.98
CHD1L-209ENST00000492728 ZBTB43O43298 467 aa21.18■□□□□ 0.98
CHD1L-209ENST00000492728 PARNO95453 639 aaKnown RBP21.18■□□□□ 0.98
CHD1L-209ENST00000492728 ADAM17P78536 824 aa21.18■□□□□ 0.98
CHD1L-209ENST00000492728 RTN1Q16799 776 aa21.18■□□□□ 0.98
CHD1L-209ENST00000492728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.18■□□□□ 0.985e-10■■■■■ 32.3
CHD1L-209ENST00000492728 LMBR1Q8WVP7 490 aa21.18■□□□□ 0.98
CHD1L-209ENST00000492728 KCNB2Q92953 911 aa21.18■□□□□ 0.98
CHD1L-209ENST00000492728 KLF18A0A0U1RQI7 1052 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 GSTTP1A0A1W2PQM5 241 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 RSPH10B2B2RC85 870 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 STXBP3O00186 592 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 TLL1O43897 1013 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 LGR5O75473 907 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 CTSHP09668 335 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 RSPH10BP0C881 870 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 MICALL1Q8N3F8 863 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 DBF4BQ8NFT6 615 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 ARNTL2Q8WYA1 636 aa21.17■□□□□ 0.98
CHD1L-209ENST00000492728 RBM28Q9NW13 759 aaKnown RBP21.17■□□□□ 0.98
CHD1L-209ENST00000492728 PRRC2BQ5JSZ5 2229 aaKnown RBP21.16■□□□□ 0.98
CHD1L-209ENST00000492728 ABHD14A-ACY1A0A1B0GW23 586 aa21.16■□□□□ 0.98
CHD1L-209ENST00000492728 SPDYE3A6NKU9 549 aa21.16■□□□□ 0.98
CHD1L-209ENST00000492728 GOLGA8AA7E2F4 631 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms