RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 MYH7BA7E2Y1 1941 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 PTPRSQ13332 1948 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 NCOR1O75376 2440 aa16.86■□□□□ 0.29
SS18L1-205ENST00000492466 PRRC2BQ5JSZ5 2229 aaKnown RBP16.85■□□□□ 0.29
SS18L1-205ENST00000492466 EPOPA6NHQ4 379 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 CPLX1O14810 134 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 NAPAP54920 295 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 PGM5Q15124 567 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 TCTN1Q2MV58 587 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 TRIM71Q2Q1W2 868 aaKnown RBP16.85■□□□□ 0.29
SS18L1-205ENST00000492466 HSDL1Q3SXM5 330 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 SAMD3Q8N6K7 520 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 ATXN2LQ8WWM7 1075 aaKnown RBP16.85■□□□□ 0.29
SS18L1-205ENST00000492466 GPKOWQ92917 476 aaPredicted RBP eCLIP16.85■□□□□ 0.29
SS18L1-205ENST00000492466 WNT8BQ93098 351 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 SLC9A7Q96T83 725 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 NOD1Q9Y239 953 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 MRVI1Q9Y6F6 885 aa16.85■□□□□ 0.29
SS18L1-205ENST00000492466 RFXAPO00287 272 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 NBNO60934 754 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 CXCL10P02778 98 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 ZNF286BP0CG31 522 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 MYCLP12524 364 aaPredicted RBP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 ACTN1P12814 892 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 POU3F3P20264 500 aaPredicted RBP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 PSEN2P49810 448 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 CCT2P78371 535 aaKnown RBP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 TAP1Q03518 808 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 STK3Q13188 491 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 CPLX2Q6PUV4 134 aaKnown RBP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 HERC6Q8IVU3 1022 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 DHX37Q8IY37 1157 aaKnown RBP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 ASB2Q96Q27 587 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 FTOQ9C0B1 505 aaKnown RBP eCLIP16.84■□□□□ 0.29
SS18L1-205ENST00000492466 BCAS3Q9H6U6 928 aa16.84■□□□□ 0.29
SS18L1-205ENST00000492466 PPFIA4O75335 1185 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 CKBP12277 381 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 SELPP16109 830 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 CDC27P30260 824 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
SS18L1-205ENST00000492466 NID2Q14112 1375 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 MBTPS1Q14703 1052 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 MFSD10Q14728 455 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 ANKRD1Q15327 319 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 KIAA0753Q2KHM9 967 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 C8orf34Q49A92 452 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 LRRC8DQ7L1W4 858 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 SPRED2Q7Z698 418 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.28
SS18L1-205ENST00000492466 C16orf70Q9BSU1 422 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
SS18L1-205ENST00000492466 FRMPD4Q14CM0 1322 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 hCG_1984214I3L0E3 225 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 SEC24BO95487 1268 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 TGFB3P10600 412 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 UBA1P22314 1058 aaKnown RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 CCND2P30279 289 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 ADD1P35611 737 aaKnown RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 WDR5P61964 334 aaKnown RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 MRPS9P82933 396 aaKnown RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 ZNF200P98182 395 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 KCNV1Q6PIU1 500 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 TRIM22Q8IYM9 498 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 FBXL16Q8N461 479 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 ZNF713Q8N859 430 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 C7orf31Q8N865 590 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 AGXT2Q9BYV1 514 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 EHMT1Q9H9B1 1298 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 NCOA5Q9HCD5 579 aaKnown RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 MTCH2Q9Y6C9 303 aa16.82■□□□□ 0.28
SS18L1-205ENST00000492466 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-205ENST00000492466 SPDYE3A6NKU9 549 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 SORBS3O60504 671 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 GGPS1O95749 300 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
SS18L1-205ENST00000492466 PTK7Q13308 1070 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 WWC2Q6AWC2 1192 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 TMCO2Q7Z6W1 182 aaPredicted RBP16.81■□□□□ 0.28
SS18L1-205ENST00000492466 CCDC155Q8N6L0 562 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 SPATA33Q96N06 139 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 KATNAL1Q9BW62 490 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 PSTPIP2Q9H939 334 aa16.81■□□□□ 0.28
SS18L1-205ENST00000492466 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 LPXNO60711 386 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
SS18L1-205ENST00000492466 HOXC8P31273 242 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 ADCY7P51828 1080 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 NEK4P51957 841 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 DEFB103AP81534 67 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 MRPS5P82675 430 aaKnown RBP16.8■□□□□ 0.28
SS18L1-205ENST00000492466 SEMA3FQ13275 785 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms