RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MICAL3Q7RTP6 2002 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 REV3LO60673 3130 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 BDP1A6H8Y1 2624 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 ZBBXA8MT70 800 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 MAFGO15525 162 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 ARHGEF15O94989 841 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 LGALS2P05162 132 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 CA3P07451 260 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 KCNA2P16389 499 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 ITGB5P18084 799 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 RCAN1P53805 252 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 WDR5P61964 334 aaKnown RBP9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 PPP2R2DQ66LE6 453 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 DHX32Q7L7V1 743 aaKnown RBP9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 RPAINQ86UA6 219 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 RASEFQ8IZ41 740 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 FBXL16Q8N461 479 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 ATXN2LQ8WWM7 1075 aaKnown RBP9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 GPRASP2Q96D09 838 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 ALG1Q9BT22 464 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 RNPEPQ9H4A4 650 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 RTEL1Q9NZ71 1219 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 TELO2Q9Y4R8 837 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 UBIAD1Q9Y5Z9 338 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 SPTBN5Q9NRC6 3674 aaKnown RBP9.65□□□□□ -0.86
SMARCB1-207ENST00000491967 EMSYQ7Z589 1322 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 EPOPA6NHQ4 379 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 CCDC69A6NI79 296 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 LPXNO60711 386 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 EFCAB14O75071 495 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 ATP9AO75110 1047 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 SMIM10L2AP0DMW4 78 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 SMIM10L2BP0DMW5 78 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 PLEKHG4Q58EX7 1191 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 FAM26DQ5JW98 314 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 RNF20Q5VTR2 975 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 APOA5Q6Q788 366 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 SKAP1Q86WV1 359 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 CMTR1Q8N1G2 835 aaKnown RBP9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 GIMAP8Q8ND71 665 aaPredicted RBP9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 SMARCC2Q8TAQ2 1214 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 SYMPKQ92797 1274 aaKnown RBP9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 CUL5Q93034 780 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 NEK1Q96PY6 1258 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 ANO2Q9NQ90 1003 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 PRDM6Q9NQX0 595 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 SEC63Q9UGP8 760 aaKnown RBP9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 BRPF3Q9ULD4 1205 aa9.64□□□□□ -0.87
SMARCB1-207ENST00000491967 MUC3AQ02505 3323 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 GSTTP1A0A1W2PQM5 241 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 C17orf102A2RUQ5 167 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 MBLAC1A4D2B0 266 aaPredicted RBP9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 KIF28PB7ZC32 967 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 TREHO43280 583 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 LGR5O75473 907 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 GJB5O95377 273 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 RXRAP19793 462 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 CHMP4BP1P59074 171 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 DEFB103AP81534 67 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 IKBKEQ14164 716 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 ADCK5Q3MIX3 580 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 NFXL1Q6ZNB6 911 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 NLRX1Q86UT6 975 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 ATP6V0A1Q93050 837 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 CDHR1Q96JP9 859 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 ASB2Q96Q27 587 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 LRRC2Q9BYS8 371 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 JADE2Q9NQC1 790 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 RBM28Q9NW13 759 aaKnown RBP9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 MTCH2Q9Y6C9 303 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 SIP14410 1827 aa9.63□□□□□ -0.87
SMARCB1-207ENST00000491967 CNTNAP5Q8WYK1 1306 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 NRCAMQ92823 1304 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 COL4A6Q14031 1691 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 TTC3P53804 2025 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 RSPH10B2B2RC85 870 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 hCG_1984214I3L0E3 225 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 NOP56O00567 594 aaKnown RBP9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 SORBS3O60504 671 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 HMGB1P09429 215 aaKnown RBP9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 RSPH10BP0C881 870 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 GNAT1P11488 350 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 KCNJ6P48051 423 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 ERVK-21P61565 698 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 HTRA4P83105 476 aaPredicted RBP9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 KRT32Q14532 448 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 WWC2Q6AWC2 1192 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 PPP1R18Q6NYC8 613 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 ZNF713Q8N859 430 aaPredicted RBP9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 DBF4BQ8NFT6 615 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 CRYGNQ8WXF5 182 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 RAD9AQ99638 391 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms