RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 LGALS2P05162 132 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 SMIM10L2AP0DMW4 78 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 SMIM10L2BP0DMW5 78 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 TGFB3P10600 412 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 CCND2P30279 289 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 COL19A1Q14993 1142 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 SAMD3Q8N6K7 520 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 APBB2Q92870 758 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
SSR4-212ENST00000491833 CLDND1Q9NY35 253 aa16.8■□□□□ 0.28
SSR4-212ENST00000491833 PIEZO1Q92508 2521 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 ATG2AQ2TAZ0 1938 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 H3BRB1 525 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 NOP56O00567 594 aaKnown RBP16.79■□□□□ 0.28
SSR4-212ENST00000491833 TREHO43280 583 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 MRE11P49959 708 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 RPAINQ86UA6 219 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 VSIG10LQ86VR7 867 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 ADHFE1Q8IWW8 467 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 IL31RAQ8NI17 732 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
SSR4-212ENST00000491833 TUT1Q9H6E5 874 aaKnown RBP16.79■□□□□ 0.28
SSR4-212ENST00000491833 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
SSR4-212ENST00000491833 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.78■□□□□ 0.28
SSR4-212ENST00000491833 ZBTB5O15062 677 aa16.78■□□□□ 0.28
SSR4-212ENST00000491833 NCK2O43639 380 aa16.78■□□□□ 0.28
SSR4-212ENST00000491833 HOXA13P31271 388 aaPredicted RBP16.78■□□□□ 0.28
SSR4-212ENST00000491833 CTNNB1P35222 781 aa16.78■□□□□ 0.28
SSR4-212ENST00000491833 SP2Q02086 613 aa16.78■□□□□ 0.28
SSR4-212ENST00000491833 NHLH1Q02575 133 aa16.78■□□□□ 0.28
SSR4-212ENST00000491833 IFIT1BQ5T764 474 aaKnown RBP16.78■□□□□ 0.28
SSR4-212ENST00000491833 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
SSR4-212ENST00000491833 POTEB3A0JP26 581 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 C19orf67A6NJJ6 358 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 PPP1R11O60927 126 aaPredicted RBP16.77■□□□□ 0.28
SSR4-212ENST00000491833 GNAT1P11488 350 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 SDSP20132 328 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.28
SSR4-212ENST00000491833 GNPTABQ3T906 1256 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 POTEBQ6S5H4 581 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 STAG2Q8N3U4 1231 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 FIBCD1Q8N539 461 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 GPKOWQ92917 476 aaPredicted RBP eCLIP16.77■□□□□ 0.28
SSR4-212ENST00000491833 MTMR8Q96EF0 704 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
SSR4-212ENST00000491833 C11orf84Q9BUA3 381 aaPredicted RBP16.77■□□□□ 0.28
SSR4-212ENST00000491833 UPF3BQ9BZI7 483 aaKnown RBP16.77■□□□□ 0.28
SSR4-212ENST00000491833 KRT23Q9C075 422 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 LMAN2LQ9H0V9 348 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 RNPEPQ9H4A4 650 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 ZSWIM5Q9P217 1185 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 ZNF215Q9UL58 517 aaPredicted RBP16.77■□□□□ 0.28
SSR4-212ENST00000491833 RWDD3Q9Y3V2 267 aa16.77■□□□□ 0.28
SSR4-212ENST00000491833 ADGRA3Q8IWK6 1321 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 KLRF2D3W0D1 207 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 C5orf67F2Z3F1 127 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 GCOM1H8Y6P7 765 aaPredicted RBP16.76■□□□□ 0.27
SSR4-212ENST00000491833 POLR2MP0CAP2 368 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 TRAF1Q13077 416 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 USP26Q9BXU7 913 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 DIAPH3Q9NSV4 1193 aa16.76■□□□□ 0.27
SSR4-212ENST00000491833 RB1P06400 928 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 IRS1P35568 1242 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
SSR4-212ENST00000491833 NEDD9Q14511 834 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 SMAD2Q15796 467 aaKnown RBP16.75■□□□□ 0.27
SSR4-212ENST00000491833 CWC27Q6UX04 472 aaKnown RBP16.75■□□□□ 0.27
SSR4-212ENST00000491833 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 FCHSD1Q86WN1 690 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
SSR4-212ENST00000491833 DSCC1Q9BVC3 393 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 LNPKQ9C0E8 428 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 SETD4Q9NVD3 440 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 MAD2L2Q9UI95 211 aa16.75■□□□□ 0.27
SSR4-212ENST00000491833 STAM2O75886 525 aa16.74■□□□□ 0.27
SSR4-212ENST00000491833 NEFLP07196 543 aa16.74■□□□□ 0.27
SSR4-212ENST00000491833 ARHGAP4P98171 946 aa16.74■□□□□ 0.27
SSR4-212ENST00000491833 HFE2Q6ZVN8 426 aa16.74■□□□□ 0.27
SSR4-212ENST00000491833 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
SSR4-212ENST00000491833 DOCK5Q9H7D0 1870 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 FRMPD4Q14CM0 1322 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 MBTPS2O43462 519 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 ICAM3P32942 547 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 LTBRP36941 435 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 HYAL1Q12794 435 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 SMAD4Q13485 552 aaKnown RBP16.73■□□□□ 0.27
SSR4-212ENST00000491833 CLUL1Q15846 466 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 CTC1Q2NKJ3 1217 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 FAM26DQ5JW98 314 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 CYFIP1Q7L576 1253 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 LMBR1Q8WVP7 490 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 MFSD14AQ96MC6 490 aa16.73■□□□□ 0.27
SSR4-212ENST00000491833 INPP4AQ96PE3 977 aaPredicted RBP16.73■□□□□ 0.27
SSR4-212ENST00000491833 PIGSQ96S52 555 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms